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AT3G52890.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : KCBP-interacting protein kinase
Curator
Summary (TAIR10)
KCBP-interacting protein kinase interacts specifically with the tail region of KCBP
Computational
Description (TAIR10)
KCBP-interacting protein kinase (KIPK); FUNCTIONS IN: protein binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G36350.1); Has 124560 Blast hits to 89262 proteins in 3560 species: Archae - 52; Bacteria - 15690; Metazoa - 49589; Fungi - 14453; Plants - 20319; Viruses - 421; Other Eukaryotes - 24036 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G52890-MONOMERBioCyc:ARA:GQT-758-MONOMERBioGrid:9772EC:2.7.11.1
eggNOG:ENOG410XQ0CeggNOG:KOG0610EMBL:AF236104EMBL:AL132969
EMBL:AY124003EMBL:BT001910EMBL:BT002286EMBL:CP002686
EnsemblPlants:AT3G52890EnsemblPlants:AT3G52890.1EnsemblPlants:AT3G52890.2entrez:824455
GeneID:824455Genevisible:Q9LFA2GO:GO:0004672GO:GO:0004674
GO:GO:0005524GO:GO:0005634GO:GO:0005737GO:GO:0005886
GO:GO:0016301GO:GO:0035556Gramene:AT3G52890.1Gramene:AT3G52890.2
hmmpanther:PTHR24351hmmpanther:PTHR24351:SF92HOGENOM:HOG000233027InParanoid:Q9LFA2
IntAct:Q9LFA2InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
iPTMnet:Q9LFA2KEGG:ath:AT3G52890OMA:NCIQPFCPaxDb:Q9LFA2
Pfam:PF00069Pfam:Q9LFA2Pfscan:PS50011PhylomeDB:Q9LFA2
PIR:T47546PRIDE:Q9LFA2PRO:PR:Q9LFA2PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9LFA2Proteomes:UP000006548RefSeq:NP_566973.2
RefSeq:NP_850687.1scanprosite:PS00108SMART:SM00220SMR:Q9LFA2
STRING:3702.AT3G52890.1SUPFAM:SSF56112TAIR:AT3G52890tair10-symbols:KIPK
UniGene:At.9852UniProt:Q9LFA2
Coordinates (TAIR10) chr3:+:19609150..19612032
Molecular Weight (calculated) 102699.00 Da
IEP (calculated) 7.53
GRAVY (calculated) -0.53
Length 934 amino acids
Sequence (TAIR10)
(BLAST)
001: MGSFAGACEI VEEKDDEVRL PKHSGRYGKS VMGSSSKDLV ERKQREYHGS LEYDIDMLFQ SISVKPSTTR LMSSSFHHHE TSASAGPSRT TSPSKRIASM
101: KKPGTPQSPR FVGLSDSVSL KQALRDRCIS KASEMAAQKR LSKSAAASPR VSEADRIKSL YNQVSNESTS SRSGLVPVDK GKGSLVEIPL MPVNDKPSSS
201: KSVPQRFEDP SNPISEPSQA GTSFGLQGVG NQTREIKLLH RSNKPGSCLS SGSGDYEIEL DENVASPSTH AFVEDDVIEI DKHVTSLPSH SSKKVNATEL
301: DKNISSSAVD SEQKGKLDDA PNSGTENGKT VRKVTRMIPR PKQPKKKILL KKKLKIGVVS ATYPTKDDEE IVPSLDSSAN QLLCQRCHCS LKSTSIDDNP
401: PSYTSSHNPK ICTDSLSSVS NKEAHQGSDE NSSGSCNVSQ SSEADIVIMK QDVSSSNNSG IGAMVEKETE NPTSSEKFEF SLSSKDSLGD YSRSTSISEE
501: SNLSRFSCGN KPHMSMDVRW EAIKHIKVQY GSLGLRHFNL LKKLGCGDIG TVYLAELIGT NCLFAIKVMD NEFLARRKKS PRAQAEREIL KMLDHPFLPT
601: LYAQFTSDNL SCLVMEYCPG GDLHVLRQKQ LGRCFPEPAA RFYVAEILLA LEYLHMLGII YRDLKPENIL VREDGHIMLT DFDLSLRCAV NPTLVRSNSP
701: PGKDPARISG PYNTSNCIQP FCITEPSCQV SCFSPRLSSN QQQGRKPKRG DHLSKTQQHL SRSLPQLVAE PTEARSNSFV GTHEYLAPEI IKGEGHGAAV
801: DWWTFGVLLY ELLYGKTPFK GYNNDETLAN VVLQNLKFPD SPLVSFQAKD LIRGLLVKEP ENRLGSEKGS VEIKRHPFFE GLNWALIRCA IPPELPDFYE
901: YGGGPEAAAD SPGGSNNRYL ECKAIGDHLE FELF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)