AT2G25560.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : DNAJ heat shock N-terminal domain-containing protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
DNAJ heat shock N-terminal domain-containing protein; FUNCTIONS IN: unfolded protein binding, heat shock protein binding; INVOLVED IN: protein folding; LOCATED IN: cellular_component unknown; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Molecular chaperone, heat shock protein, Hsp40, DnaJ (InterPro:IPR015609), Heat shock protein DnaJ, N-terminal (InterPro:IPR001623), Heat shock protein DnaJ (InterPro:IPR003095); BEST Arabidopsis thaliana protein match is: DNAJ heat shock N-terminal domain-containing protein (TAIR:AT5G53150.1); Has 20792 Blast hits to 20618 proteins in 3216 species: Archae - 156; Bacteria - 8815; Metazoa - 3438; Fungi - 1745; Plants - 2340; Viruses - 13; Other Eukaryotes - 4285 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:+:10881790..10883760 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 73101.20 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.36 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||||||||||
| Length | 656 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEFNKEEATR AREIAKRKFL ANDFAGARKF ALKAQFLYPE LDGIAQMVAT FDVHLSAQNI IYGDVDHYGV LGLNPEADDE IVRKRYRKLA VMLHPDRNKS 101: VGAEEAFKFL SQAWGVFSDK AKRADYDLKR NVGLYKGGGA SSSRPATNGF QKVTKASGNT TKVKSSKRGI KRASDASAAA TTSTSAQKTT ADGTFWTVCR 201: TCRTQYEYHS VYLNQNLLCP NCRKPFIAVE TDPPGSGSIR KTFHEHQFDS LRHTTDGRKK NVPGRDNNGV YGEYDSFEWG VFTGTKTSAH ATPTGSRKDE 301: VVRREYTKRT AGPSSTIPPK RRKVMENAVA GGNIASCLAP KSTGVKEVSE DELKNLLKKK AKSVISRNLP ELCTIVAETE TNGRGMETED LNGFNAGSSV 401: NKNAIESCCM NTDKELNSLG ALTLDVTAPD FCDFDKDRTE KSVKDNQIWA FYDSHEGLPR SYALIHNVIS VDPFKVRMSW LTPVTNGEPS STNWLGFGIP 501: KSCGGFRVRK TLIYRSPYSF SHKVNLVKGN HGEFLIYPRT GDVWALYRKW SPDWNYLTGV ETVEYDIVEV VEGYTEEYGV VVVPLVKVAG FKAVFHHHLD 601: SKETKRFLRD EISRFSHKIP SYLLTGQEAP GAPRGCRQLD PAATPSQLLQ AIDDYR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)