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AT5G45900.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 0.684
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ThiF family protein
Curator
Summary (TAIR10)
Component of autophagy conjugation pathway. Required for proper senescence.
Computational
Description (TAIR10)
AUTOPHAGY 7 (APG7); FUNCTIONS IN: APG8 activating enzyme activity; INVOLVED IN: autophagy, protein amino acid lipidation, leaf senescence, aging; LOCATED IN: cytoplasm; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: E1-like protein-activating enzyme Gsa7p/Apg7p (InterPro:IPR006285), UBA/THIF-type NAD/FAD binding fold (InterPro:IPR000594), Molybdenum cofactor biosynthesis, MoeB (InterPro:IPR009036), NAD(P)-binding domain (InterPro:IPR016040); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:19879eggNOG:COG0476eggNOG:KOG2337EMBL:AB016870
EMBL:AB073173EMBL:AF492761EMBL:AY034945EMBL:AY150456
EMBL:CP002688EnsemblPlants:AT5G45900EnsemblPlants:AT5G45900.1entrez:834630
Gene3D:3.40.50.720GeneID:834630Genevisible:Q94CD5GO:GO:0000422
GO:GO:0005829GO:GO:0006497GO:GO:0006501GO:GO:0006914
GO:GO:0006995GO:GO:0010150GO:GO:0015031GO:GO:0016236
GO:GO:0019778GO:GO:0019779GO:GO:0030163GO:GO:0032446
GO:GO:0034727GO:GO:0044805GO:GO:0050832Gramene:AT5G45900.1
hmmpanther:PTHR10953hmmpanther:PTHR10953:SF3HOGENOM:HOG000162379InParanoid:Q94CD5
IntAct:Q94CD5InterPro:IPR000594InterPro:IPR006285InterPro:IPR016040
InterPro:IPR032197KEGG:ath:AT5G45900KO:K08337MINT:MINT-8414464
OMA:VMAIPMPPANTHER:PTHR10953:SF3PaxDb:Q94CD5PDB:3VX8
PDBsum:3VX8Pfam:PF00899Pfam:PF16420Pfam:Q94CD5
PhylomeDB:Q94CD5PRIDE:Q94CD5PRO:PR:Q94CD5ProteinModelPortal:Q94CD5
Proteomes:UP000006548Reactome:R-ATH-1632852RefSeq:NP_568652.1SMR:Q94CD5
STRING:3702.AT5G45900.1SUPFAM:SSF69572TAIR:AT5G45900tair10-symbols:APG7
tair10-symbols:ATAPG7tair10-symbols:ATATG7tair10-symbols:ATG7TIGRfam:TIGR01381
TIGRFAMs:TIGR01381UniGene:At.7711UniProt:Q94CD5
Coordinates (TAIR10) chr5:+:18615304..18618436
Molecular Weight (calculated) 76525.70 Da
IEP (calculated) 4.72
GRAVY (calculated) -0.14
Length 697 amino acids
Sequence (TAIR10)
(BLAST)
001: MAEKETPAII LQFAPLNSSV DEGFWHSFSS LKLDKLGIDD SPISITGFYG PCGHPQVSNH LTLLSESLPL DEQSLIASTS HGNRNKCPVP GILYNTNTVE
101: SFNKLDKQSL LKAEANKIWE DIQSGKALED PSVLPRFLVI SFADLKKWSF RYWFAFPAFV LDPPVSLIEL KPASEYFSSE EAESVSAACN DWRDSDLTTD
201: VPFFLVSVSS DSKASIRHLK DLEACQGDHQ KLLFGFYDPC HLPSNPGWPL RNYLALIRSR WNLETVWFFC YRESRGFADL NLSLVGQASI TLSSGESAET
301: VPNSVGWELN KGKRVPRSIS LANSMDPTRL AVSAVDLNLK LMRWRALPSL NLNVLSSVKC LLLGAGTLGC QVARTLMGWG IRNITFVDYG KVAMSNPVRQ
401: SLYNFEDCLG RGEFKAVAAV KSLKQIFPAM ETSGVVMAIP MPGHPISSQE EDSVLGDCKR LSELIESHDA VFLLTDTRES RWLPSLLCAN ANKIAINAAL
501: GFDSYMVMRH GAGPTSLSDD MQNLDINKTN TQRLGCYFCN DVVAPQDSMT DRTLDQQCTV TRPGLAPIAG ALAVELLVGV LQHPLGINAK GDNSSLSNTG
601: NNDDSPLGIL PHQIRGSVSQ FSQITLLGQA SNSCTACSET VISEYRERGN SFILEAINHP TYLEDLTGLT ELKKAANSFN LDWEDDDTDD DDVAVDL
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)