AT5G49570.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:vacuole 0.793 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : peptide-N-glycanase 1 | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein that has peptide:N-glycanase activity in enzymatic assay in heterologous systems (although the activity was not detected in wild-type plants). | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
peptide-N-glycanase 1 (PNG1); CONTAINS InterPro DOMAIN/s: Transglutaminase-like (InterPro:IPR002931), DNA repair protein Rad4, transglutaminase-like domain (InterPro:IPR018325), Galactose-binding domain-like (InterPro:IPR008979); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:-:20112071..20116125 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 82450.50 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.17 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.52 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 721 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVARKFVVRH EDSSFDVDYN TEDGLEVLRF LIFSLTLVPP EEQKIVAEDD NRLVSDESDL ASLSERLRLV SVGEDSVENS DAEMLKSDEE LARMLQAEED 101: AIMFQQFVAA RDNGEFEGRI RPYVSQVLMY EDPVRQDAAR KTVPKDELEE KALVSLAKEG NFEPSKEERD YAFLLQLLFW FKKSFRWVNE PPCDFCGNKT 201: IGQGMGNPLT SELAYGANRV EIYRCTMCPT TTRFPRYNDP LKLVETKKGR CGEWANCFTL YCRTFGYDSR LIMDFTDHVW TECYSHSLKR WIHLDPCEGV 301: YDKPMLYEKG WNKKLNYVIA ISKDGVCDVT KRYTKKWHEV LSRRTLTTES SLQDGLRTLT RERRRSLMFE SLSKLELRDR NEQEELERNL HSADNASVSL 401: PGRQSGDREW RIMRSEFGSD ENSSVSSSSC PVRKCVDDHV TNIYDSFLPI LTQFVEDGLP VARTNEVLKM IKQVLVDLKN APYKTRKARL TLDSDNSSSF 501: PEQFLPALGD LLLALSLKSE RDTNGKSVTI SVDGKLTKTA IALPVALDAL RELVADLSKY QNLNKDSLSF PLVKQNRVCS GSVLASGEEL PSGIATAAFD 601: GIQESKWEEP NGAKGCWIVY KTLYNQMHQL IAYELMSAND APERDPKDWI LEGSNDGGST WCVLDKQTSQ VFEERFQRKS YKITTPGFQA NLFRFRFLSV 701: RDVNSTSRLQ LGSIDLYRSH Q |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)