AT1G03290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G02880.2); Has 13587 Blast hits to 10183 proteins in 1114 species: Archae - 257; Bacteria - 2402; Metazoa - 5637; Fungi - 960; Plants - 675; Viruses - 54; Other Eukaryotes - 3602 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:807970..810680 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 63330.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.38 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.54 | ||||||||||||||||||||||||||||
| Length | 571 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGFGSVYRSL TEIFPQIDAR ILRAVAIEHP KDADEAAAVV LSEIIPSFSS NLFHNFTQSS YKSSGSISER EVEHGLEDVA SRCRPFLGAS GSKASTSSSS 101: SSSETLPLVV TRDHNTRALS TDLVSNMNEL TTLQPNVDPD VCHKDLESEE IQSVKKARGK ENGNYDLFGR CFDVTSNAKI GLDVPEDDIA SVVSLFSLDN 201: VKLASNFWED LGFDITWNQA ENAVSKLVDS TPGDTMTTTQ QGSCFEVGHG STNLVDETSN RSLFSENGDT EIGDAFSTST HVCSVDQLED IIEDAKSNKK 301: NLLTEMETVT NIMREVELKE KDAEKSKEEA ARGGLDTLQK VEELKKMLEH AKEANDMHAG EVYGEKSILA TEVKELENRL LNLSEERNKS LAILDEMRGS 401: LEIRLAAALE LKKTAEKEKK DKEDSALKAL AEQEANMEKV VQESKLLQQE AEENSKLRDF LMDRGQIVDT LQGEISVICQ DVKLLKEKFE NRVPLTKSIS 501: SSFTSSCGSS MKSLVLENPS ERLNGVTETS NNNKFPEAAA FFMNKEKDDC RDLLEDGWDI FDKETEQVVW Y |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)