AT3G58640.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.993 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Mitogen activated protein kinase kinase kinase-related | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Mitogen activated protein kinase kinase kinase-related; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT2G31010.2); Has 125470 Blast hits to 123383 proteins in 4957 species: Archae - 158; Bacteria - 13680; Metazoa - 47784; Fungi - 11367; Plants - 32991; Viruses - 518; Other Eukaryotes - 18972 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:21687153..21692675 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90027.10 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.71 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.42 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 809 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MGETGDDAGP SEQGPSNQTW WPSEFVEKFG SVYLGSQEET SSTKDSPRNL GQDGLPSSTA SNILWSTGSL SEPIPNGFYS VIPDNRLKQL FNNIPTLEDL 101: HALGDEGLKA DVILVDFQKD KKLFRQKQLI TKLVSGLNSK PATIIKKIAG LVADVYKQST LQSPAKSTQS FENCGIQLLG QIKHGSCRPR AILFKVLADT 201: VGLQSRLVVG LPSDGAAESV DSYSHISVTV LLNSVEMLVD LMRFPGQLIP LSTKAIFMSH ISAAGESDSA ENDSCDSPLE PNSPMFGYPE KFDHENAEKD 301: ENLSLHRKLD GSPNTSGPPS RNMLLRSASA LERKLSFSQS ESNMANEFWR QSRRKVIADQ RTASSSPEHL SFRARTKSML SGDKNLARDF TGDVATSSCK 401: SVGGAKMETK RIRRRSISIT PEIGDDIVRA VRAMNEALKQ NRLSKEQGDD DSSPNSPNDR TESSHLQKNV SGFHLDAHDQ VSGGRSTLSR EPLDPQKAIS 501: LPSSPQNYRS QYEQSGSSHR NISHIWDKVL GSPMFQNKPL LPYEEWNIDF SELTVGTRVG IGFFGEVFRG IWNGTDVAIK VFLEQDLTAE NMEDFCNEIS 601: ILSRLRHPNV ILFLGACTKP PRLSLITEYM EMGSLYYLLH LSGQKKRLSW RRKLKMLRDI CRGLMCIHRM GIVHRDIKSA NCLLSNKWTV KICDFGLSRI 701: MTGTTMRDTV SAGTPEWMAP ELIRNEPFSE KCDIFSLGVI MWELCTLTRP WEGVPPERVV YAIAYEGARL EIPEGPLGKL IADCWTEPEQ RPSCNEILSR 801: LLDCEYSLC |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)