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AT5G09330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : NAC domain containing protein 82
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
NAC domain containing protein 82 (NAC082); FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: multicellular organismal development, regulation of transcription; LOCATED IN: cellular_component unknown; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: No apical meristem (NAM) protein (InterPro:IPR003441); BEST Arabidopsis thaliana protein match is: NAC domain containing protein 103 (TAIR:AT5G64060.1); Has 3286 Blast hits to 2997 proteins in 111 species: Archae - 0; Bacteria - 34; Metazoa - 211; Fungi - 2; Plants - 2912; Viruses - 0; Other Eukaryotes - 127 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IWBMeggNOG:ENOG410Y957EMBL:AK317217EMBL:AL391712
EMBL:BT020263EMBL:CP002688EnsemblPlants:AT5G09330EnsemblPlants:AT5G09330.1
EnsemblPlants:AT5G09330.2EnsemblPlants:AT5G09330.3EnsemblPlants:AT5G09330.4entrez:830792
GeneID:830792Genevisible:Q9FY82GO:GO:0003677GO:GO:0003700
GO:GO:0005634GO:GO:0006351Gramene:AT5G09330.1Gramene:AT5G09330.2
Gramene:AT5G09330.3Gramene:AT5G09330.4hmmpanther:PTHR31989hmmpanther:PTHR31989:SF14
HOGENOM:HOG000237406InParanoid:Q9FY82IntAct:Q9FY82InterPro:IPR003441
KEGG:ath:AT5G09330OMA:QDLTAPFPaxDb:Q9FY82Pfam:PF02365
Pfscan:PS51005PhylomeDB:Q9FY82PRIDE:Q9FY82PRO:PR:Q9FY82
PROSITE:PS51005ProteinModelPortal:Q9FY82Proteomes:UP000006548RefSeq:NP_001078551.1
RefSeq:NP_001078552.1RefSeq:NP_001154700.1RefSeq:NP_196495.1SMR:Q9FY82
STRING:3702.AT5G09330.1SUPFAM:SSF101941TAIR:AT5G09330tair10-symbols:anac082
tair10-symbols:NAC082tair10-symbols:VNI1UniGene:At.48014UniGene:At.67761
UniProt:Q9FY82
Coordinates (TAIR10) chr5:-:2892623..2894708
Molecular Weight (calculated) 54445.30 Da
IEP (calculated) 4.47
GRAVY (calculated) -0.65
Length 489 amino acids
Sequence (TAIR10)
(BLAST)
001: MGKTQLAPGF RFHPTDVELV RYYLKRKILG KKLLVDAIAE VDIYKFEPPD LPDMSFIRSG DLKWHFFCPR EKKYASGVRA NRATECGYWK TTGKERPVLC
101: NSEVVGKIKT LVYHFGKSPR GERTDWVMHE YRLDDKVLTQ MNVPQDTYVV CVLFKKDGPG PRNGAQYGAP FKEEDWSDEE VRTDVPSTSN PTNLLEPSKE
201: TTLALTAPDD SNKDCFGGMI SESCVSDFLP ATTNTTSELP HPSDAATTPM STAPLAETVQ TPNNDDLYSM LDLFDDDEEF LGFNNNEVRY DPGVSAPVCL
301: EEEGIFNGLP ELSSMPRTAS YDLVENSELY LELQDLTAPL NPQTGLQDLT APFNPQTGLQ DLTAPFNHQT GLQDHTAPFN PQTGLQDHTA PFNHQTGLQD
401: LTAPFNPQTG LQDLTAPFNP QTGLHDLTSP FNPQTGLQDL TAPLNPQTGN RNDPRSSSFL YNQGHFDFSG GNDDDPYGFS ASMRHRPKM
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)