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AT4G32551.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : LisH dimerisation motif;WD40/YVTN repeat-like-containing domain
Curator
Summary (TAIR10)
LEUNIG regulates floral organ identity,gynoecium and ovule development. Negatively regulates AGAMOUS . Encodes a glutamine-rich protein with seven WD repeats similar to transcriptional corepressors.
Computational
Description (TAIR10)
LEUNIG (LUG); CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), LisH dimerisation motif, subgroup (InterPro:IPR013720), WD40 repeat, conserved site (InterPro:IPR019775), WD40 repeat (InterPro:IPR001680), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), LisH dimerisation motif (InterPro:IPR006594), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: LEUNIG_homolog (TAIR:AT2G32700.6); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink).
Protein Annotations
BioGrid:14676EMBL:AF277458EMBL:AL050398EMBL:AL161581
EMBL:CP002687EnsemblPlants:AT4G32551EnsemblPlants:AT4G32551.1entrez:829390
ExpressionAtlas:Q9FUY2Gene3D:2.130.10.10GeneID:829390Genevisible:Q9FUY2
GO:GO:0001666GO:GO:0005634GO:GO:0006351GO:GO:0006974
GO:GO:0006979GO:GO:0009414GO:GO:0009611GO:GO:0009617
GO:GO:0009620GO:GO:0009624GO:GO:0009733GO:GO:0009908
GO:GO:0009909GO:GO:0009944GO:GO:0010073GO:GO:0010272
GO:GO:0010393GO:GO:0030154GO:GO:0045892GO:GO:0045995
GO:GO:0046898GO:GO:0048359GO:GO:0051512GO:GO:0071217
GO:GO:0080001GO:GO:1902074GO:GO:1902183GO:GO:2000024
hmmpanther:PTHR22847hmmpanther:PTHR22847:SF437HOGENOM:HOG000082961InParanoid:Q9FUY2
IntAct:Q9FUY2InterPro:IPR001680InterPro:IPR006594InterPro:IPR015943
InterPro:IPR017986InterPro:IPR019775ncoils:CoilPfam:PF00400
Pfam:PF08513Pfam:Q9FUY2Pfscan:PS50082Pfscan:PS50294
Pfscan:PS50896PhylomeDB:Q9FUY2PIR:T08588PRIDE:Q9FUY2
PRO:PR:Q9FUY2PROSITE:PS00678PROSITE:PS50082PROSITE:PS50294
PROSITE:PS50896ProteinModelPortal:Q9FUY2Proteomes:UP000006548RefSeq:NP_567896.1
scanprosite:PS00678SMART:SM00320SMART:SM00667SMR:Q9FUY2
SUPFAM:SSF50978TAIR:AT4G32551tair10-symbols:LUGtair10-symbols:RON2
UniGene:At.22027UniProt:Q9FUY2
Coordinates (TAIR10) chr4:+:15707863..15713359
Molecular Weight (calculated) 102239.00 Da
IEP (calculated) 7.05
GRAVY (calculated) -0.71
Length 931 amino acids
Sequence (TAIR10)
(BLAST)
001: MSQTNWEADK MLDVYIHDYL VKRDLKATAQ AFQAEGKVSS DPVAIDAPGG FLFEWWSVFW DIFIARTNEK HSEVAASYIE TQMIKAREQQ LQQSQHPQVS
101: QQQQQQQQQQ IQMQQLLLQR AQQQQQQQQQ QHHHHQQQQQ QQQQQQQQQQ QQQQQHQNQP PSQQQQQQST PQHQQQPTPQ QQPQRRDGSH LANGSANGLV
201: GNNSEPVMRQ NPGSGSSLAS KAYEERVKMP TQRESLDEAA MKRFGDNVGQ LLDPSHASIL KSAAASGQPA GQVLHSTSGG MSPQVQTRNQ QLPGSAVDIK
301: SEINPVLTPR TAVPEGSLIG IPGSNQGSNN LTLKGWPLTG FDQLRSGLLQ QQKPFMQSQS FHQLNMLTPQ HQQQLMLAQQ NLNSQSVSEE NRRLKMLLNN
401: RSMTLGKDGL GSSVGDVLPN VGSSLQPGGS LLPRGDTDML LKLKMALLQQ QQQNQQQGGG NPPQPQPQPQ PLNQLALTNP QPQSSNHSIH QQEKLGGGGS
501: ITMDGSISNS FRGNEQVLKN QSGRKRKQPV SSSGPANSSG TANTAGPSPS SAPSTPSTHT PGDVISMPNL PHSGGSSKSM MMFGTEGTGT LTSPSNQLAD
601: MDRFVEDGSL DDNVESFLSQ EDGDQRDAVT RCMDVSKGFT FTEVNSVRAS TTKVTCCHFS SDGKMLASAG HDKKAVLWYT DTMKPKTTLE EHTAMITDIR
701: FSPSQLRLAT SSFDKTVRVW DADNKGYSLR TFMGHSSMVT SLDFHPIKDD LICSCDNDNE IRYWSINNGS CTRVYKGGST QIRFQPRVGK YLAASSANLV
801: NVLDVETQAI RHSLQGHANP INSVCWDPSG DFLASVSEDM VKVWTLGTGS EGECVHELSC NGNKFQSCVF HPAYPSLLVI GCYQSLELWN MSENKTMTLP
901: AHEGLITSLA VSTATGLVAS ASHDKLVKLW K
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)