AT4G30680.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:cytosol 1.000 ASURE: cytosol What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Initiation factor eIF-4 gamma, MA3 | ||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Initiation factor eIF-4 gamma, MA3; CONTAINS InterPro DOMAIN/s: Initiation factor eIF-4 gamma, MA3 (InterPro:IPR003891); BEST Arabidopsis thaliana protein match is: MIF4G domain-containing protein / MA3 domain-containing protein (TAIR:AT2G24050.1); Has 861 Blast hits to 624 proteins in 104 species: Archae - 0; Bacteria - 2; Metazoa - 367; Fungi - 10; Plants - 428; Viruses - 0; Other Eukaryotes - 54 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr4:-:14958687..14960012 | ||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 28394.20 Da | ||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.21 | ||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||
Length | 263 amino acids | ||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MQQGDSMLSL RPGGGRGGSR RFAPRFTLSS SSDLTNGGDA PSFAVKGSGG LLNDRPSALV QGNGSQQPKP VPSPTRQTVE KPKPQPQPQE VAPPTTTSLN 101: TVELSRKTNS LLEEYFNVRL LDEALQCIEE LKTPSYHPEL VKEAISLGLE KNPPCVEPVA KLLEHLVSKN VLTPKDLRNG CLLYGSMLDD IGIDLPKAPN 201: NFGEILGSLV MAKASDSELV KEILMKMGDE WFKKAVLEAV MRSVSESLLT TEAVEVEACR GLV |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)