AT1G54310.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 0.681 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; FUNCTIONS IN: RNA binding; LOCATED IN: plasma membrane; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Pseudouridine synthase/archaeosine transglycosylase (InterPro:IPR002478); Has 2033 Blast hits to 2033 proteins in 959 species: Archae - 30; Bacteria - 1845; Metazoa - 0; Fungi - 0; Plants - 43; Viruses - 0; Other Eukaryotes - 115 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:20273618..20274678 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 27109.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 9.50 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.04 | ||||||||||||||||||||||||||||||||
| Length | 245 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVMLGVLQLP CRLHHSLFYS SSQIASSRPQ GVAKVVLKKG KTQLFKDGSP MVYSGAVDRI IGKPPPQTGD VVIVADGTEN PIGWGLYNSV SMFCVRLMQL 101: QHESTRDPSC ALNIEKLLQT RIAEAVQLRK SLALPSANTN AYRLVNSEGD RLSGLIVDVF GDIAVVASSA AWLEKYRIEV ESCLRSIDGI NHINWRPSLD 201: VLKEDGFDIS SLKQTQSSTL PQRSMVRCVV PLIRLWKMGS HTQFR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)