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AT4G22910.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
golgi 0.931
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : FIZZY-related 2
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
FIZZY-related 2 (FZR2); FUNCTIONS IN: signal transducer activity; INVOLVED IN: trichome branching, signal transduction, DNA endoreduplication, cell growth; LOCATED IN: chloroplast, heterotrimeric G-protein complex; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: WD40 repeat 2 (InterPro:IPR019782), WD40 repeat-like-containing domain (InterPro:IPR011046), WD40 repeat, conserved site (InterPro:IPR019775), WD40-repeat-containing domain (InterPro:IPR017986), WD40/YVTN repeat-like-containing domain (InterPro:IPR015943), WD40 repeat (InterPro:IPR001680), WD40 repeat, subgroup (InterPro:IPR019781); BEST Arabidopsis thaliana protein match is: cell cycle switch protein 52 A2 (TAIR:AT4G11920.1); Has 43458 Blast hits to 22953 proteins in 693 species: Archae - 46; Bacteria - 6865; Metazoa - 16440; Fungi - 9775; Plants - 5102; Viruses - 0; Other Eukaryotes - 5230 (source: NCBI BLink).
Protein Annotations
BioGrid:13679eggNOG:COG2319eggNOG:ENOG410IMNXEMBL:AL031018
EMBL:AL161558EMBL:AY099585EMBL:AY128834EMBL:CP002687
EnsemblPlants:AT4G22910EnsemblPlants:AT4G22910.1entrez:828390Gene3D:2.130.10.10
GeneID:828390Genevisible:Q8L3Z8GO:GO:0005634GO:GO:0007067
GO:GO:0010091GO:GO:0016049GO:GO:0016567GO:GO:0042023
GO:GO:0051301GO:GO:0051488GO:GO:0097027Gramene:AT4G22910.1
hmmpanther:PTHR19918hmmpanther:PTHR19918:SF1HOGENOM:HOG000195514InParanoid:Q8L3Z8
IntAct:Q8L3Z8InterPro:IPR001680InterPro:IPR015943InterPro:IPR017986
InterPro:IPR019775InterPro:IPR033010iPTMnet:Q8L3Z8KEGG:ath:AT4G22910
KO:K03364OMA:FIPSRTGPANTHER:PTHR19918PaxDb:Q8L3Z8
Pfam:PF00400Pfam:Q8L3Z8Pfscan:PS50082Pfscan:PS50294
PhylomeDB:Q8L3Z8PIR:T05122PRIDE:Q8L3Z8PRO:PR:Q8L3Z8
PROSITE:PS00678PROSITE:PS50082PROSITE:PS50294ProteinModelPortal:Q8L3Z8
Proteomes:UP000006548Reactome:R-ATH-68949Reactome:R-ATH-69656RefSeq:NP_194022.3
scanprosite:PS00678SMART:SM00320SMR:Q8L3Z8STRING:3702.AT4G22910.1
SUPFAM:SSF50978TAIR:AT4G22910tair10-symbols:CCS52A1tair10-symbols:FZR2
UniGene:At.2372UniPathway:UPA00143UniProt:Q8L3Z8
Coordinates (TAIR10) chr4:+:12012743..12015663
Molecular Weight (calculated) 52842.80 Da
IEP (calculated) 8.81
GRAVY (calculated) -0.41
Length 483 amino acids
Sequence (TAIR10)
(BLAST)
001: MEEEDPTASN VITNSNSSSM RNLSPAMNTP VVSLESRINR LINANQSQSP SPSSLSRSIY SDRFIPSRSG SNFALFDLSP SPSKDGKEDG AGSYATLLRA
101: AMFGPETPEK RDITGFSSSR NIFRFKTETH RSLNSFSPFG VDDDSPGVSH SGPVKAPRKV PRSPYKVLDA PALQDDFYLN LVDWSAQNVL AVGLGNCVYL
201: WNACSSKVTK LCDLGAEDSV CSVGWALRGT HLAVGTSTGK VQIWDASRCK RTRTMEGHRL RVGALAWGSS VLSSGSRDKS ILQRDIRCQE DHVSKLAGHK
301: SEVCGLKWSY DNRELASGGN DNRLFVWNQH STQPVLKYSE HTAAVKAIAW SPHVHGLLAS GGGTADRCIR FWNTTTNTHL SSIDTCSQVC NLAWSKNVNE
401: LVSTHGYSQN QIIVWKYPTM SKIATLTGHT YRVLYLAVSP DGQTIVTGAG DETLRFWNVF PSPKSQNTDS EIGSSFFGRT TIR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)