AT4G11990.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
|||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Cell cycle regulated microtubule associated protein | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Cell cycle regulated microtubule associated protein; CONTAINS InterPro DOMAIN/s: Cell cycle regulated microtubule associated protein (InterPro:IPR022021); BEST Arabidopsis thaliana protein match is: Cell cycle regulated microtubule associated protein (TAIR:AT4G22860.1); Has 149 Blast hits to 137 proteins in 30 species: Archae - 0; Bacteria - 2; Metazoa - 50; Fungi - 0; Plants - 91; Viruses - 0; Other Eukaryotes - 6 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr4:-:7186406..7189689 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 57228.50 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 9.50 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.92 | ||||||||||||||||||||||||||||
| Length | 501 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEMETDTETE SDEDMEMETM VFEVTEIDLE YEFDASRWFD FTREELPLES RAAELWFETA QSYPPSPFAM KLLMIEEVYD EKTESLSKSE DGEVTVEVQE 101: SDREIPQQPD VNETGNGMKS GVFRFIQGGT LSKVPNDSLH KGPTFSNRIH SDKLKYRPKS SIRPITRSST LMKPTASVLA KQDNARLHMQ VDEIKCLSSE 201: IQSAKRQKLD GGLLRKVAEA AQETNLVHKA LKKDLDKNSL HTRMKITIPQ EPDFATSHRA NRIRHKNDAK LEQDSTSVYR FKARPLNRKI FEAPSLPIRK 301: NSTPKLPEFQ EFRLKTSERA MQHSSAVSTS SYQGNNNHKE ADKPNRTFPD GVNREPRRQR AIDIPKDDVR KDLFKARPLN KKILSSGREI GMFTKSKRET 401: TAPLGFSFHS ERTAQPDLPT DLFSKLSLSS ELRPNNGSRL RFPQPEQVKG SKENRLNSFQ AGNERTSKFM GNPMVQPSVV PETSRQWTSR SGKLEATVQL 501: N |
||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)