AT1G61000.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.719 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
FUNCTIONS IN: molecular_function unknown; INVOLVED IN: mitosis; LOCATED IN: plasma membrane; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Kinetochore protein Nuf2 (InterPro:IPR005549); Has 50972 Blast hits to 29793 proteins in 2070 species: Archae - 902; Bacteria - 7404; Metazoa - 23628; Fungi - 4156; Plants - 2312; Viruses - 158; Other Eukaryotes - 12412 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:22471096..22474046 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 50534.30 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.63 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.56 | ||||||||||||||||||||||||||||||||
| Length | 440 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MSAYEYPRLS RSDIITALKD AQIASVTETD LKTPTSDFVS ELYTRILIYL DALDEEEKGQ VDFEALEQLE NPDHHATSMQ AMKLYCKVKD MLEMLDCPLP 101: ISFKDLLRPE SSRTEFFISA LLNYGLYKDS KMDLIRPKAE ELGLLDEQRK QCEAKVAQLN AEIGEFDEAV ERDLPFVQEL EANIEQLNKK ILELNNQQMS 201: LRATFQKMRE KSTQMDNEIS KAEFDLVETV QENANLRSQI VQSPDKLQGA LEEKKLVLGE TKKAEQSAMV TFQEKAAILE VFEKALKKIL KSSSQLQLIN 301: EQVTNAKTVE KEFKALKDKL SEDGVAYKSL EAKVVERERI VEQLNESLKQ LEKEKAVMFD DWTKQLNELK VEVESRRREL ETRQTNVESV VAMVDDNTAK 401: TNQVRQSGEA KVKKLAAKYE EIVKQFHEYT VSFDAFLPSL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)