AT3G10180.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : P-loop containing nucleoside triphosphate hydrolases superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein; FUNCTIONS IN: microtubule motor activity, ATP binding; INVOLVED IN: microtubule-based movement; EXPRESSED IN: 15 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: Kinesin, motor region, conserved site (InterPro:IPR019821), Kinesin, motor domain (InterPro:IPR001752); BEST Arabidopsis thaliana protein match is: P-loop containing nucleoside triphosphate hydrolases superfamily protein (TAIR:AT1G59540.1); Has 155291 Blast hits to 84008 proteins in 3275 species: Archae - 1854; Bacteria - 27736; Metazoa - 67441; Fungi - 13681; Plants - 10077; Viruses - 530; Other Eukaryotes - 33972 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:3146393..3154644 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 144766.00 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 5.08 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.66 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 1273 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
0001: MERIHVSVRA RPLSSEDAKT SPWKISSDSI FMPNHSSLAF EFDRIFREDC KTVQVYEART KEIVSAAVRG FNGTVFAYGQ TNSGKTHTMR GSPIEPGVIP 0101: LAVHDLFDTI YQDASREFLL RMSYLEIYNE DINDLLAPEH RKLQIHENLE KGIFVAGLRE EIVASPQQVL EMMEFGESHR HIGETNMNLY SSRSHTIFRM 0201: IIESRQKMQD EGVGNSCDAV RVSVLNLVDL AGSERAAKTG AEGVRLKEGS HINKSLMTLG TVIKKLSEGV ETQGGHVPYR DSKLTRILQP ALGGNANTAI 0301: ICNITLAPIH ADETKSSLQF ASRALRVTNC AHVNEILTDA ALLKRQKKEI EELRSKLKTS HSDHSEEEIL NLRNTLLKSE LERERIALEL EEEKKAQAQR 0401: ERVLQEQAKK IKNLSSMVLL SNRDEKREQD HFKKGKRRDT WCIGKLSRDS TSEDQSNVLS RGSSLESARS ERETGPLLPF SELVNEPLYN INEEDEDSIE 0501: GTLEDSVLPD PCALVNVTSR KKPSIKQKNP VVVENELDRI QREYEALLLQ YETERIISEI QIECLKVKLG EDGLSGDAKC KQSEVVGNVH CEEHVVNLRD 0601: PEAILLIKQL QEKINMLELE KSSSNRNLDD LVMVATEQNI CAREKFAEIQ EEIHAAREEA QVAREQLVSK ESEVIDVINE NFNSLVNVAT EIEVLESEFQ 0701: KYKASVETIS SVMNEGLQDF AFFSPLIHDF TLFVRQSSEQ HDSLINSYQT VQSSLKKKVL DVENEKLLLQ EQCAGLQSQI EELNQEAQKH ETSLKMLSEH 0801: HESERSDLLS HIECLEKDIG SLSSSSLAKE KENLRKDFEK TKTKLKDTES KLKNSMQDKT KLEAEKASAE RELKRLHSQK ALLERDISKQ ESFAGKRRDS 0901: LLVERSANQS LQEEFKQLEV LAFEMETTIA SLEEELAAER GEKEEALCRN DGLGSEITDL TEKLEHSNTK LEHLQNDVTE LKTRLEVSSS DQQQLETNVK 1001: QLLEEKEELA MHLANSLLEM EEEKAIWSSK EKALTEAVEE KIRLYKNIQI ESLSKEMSEE KKELESCRLE CVTLADRLRC SEENAKQDKE SSLEKSLEID 1101: RLGDELRSAD AVSKQSQEVL KSDIDILKSE VQHACKMSDT FQREMDYVTS ERQGLLARIE ELSKELASSN RWQIENAKNP IQDLTLKISS QETNLHKDAA 1201: AENKEKAKLK MRLRGMQARL DAISLRYKQS VQESELMNRK FKEASAKLKE KLASKALEVL DLKKQLSASS RTM |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)