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AT4G11460.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : cysteine-rich RLK (RECEPTOR-like protein kinase) 30
Curator
Summary (TAIR10)
Encodes a cysteine-rich receptor-like protein kinase.
Computational
Description (TAIR10)
cysteine-rich RLK (RECEPTOR-like protein kinase) 30 (CRK30); FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 13 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Protein of unknown function DUF26 (InterPro:IPR002902), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Concanavalin A-like lectin/glucanase (InterPro:IPR008985), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: cysteine-rich RLK (RECEPTOR-like protein kinase) 31 (TAIR:AT4G11470.1); Has 121801 Blast hits to 120416 proteins in 4734 species: Archae - 98; Bacteria - 13989; Metazoa - 44659; Fungi - 10692; Plants - 34186; Viruses - 446; Other Eukaryotes - 17731 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G11460-MONOMERBioGrid:12050EC:2.7.11.-EMBL:AL050399
EMBL:AL161532EMBL:CP002687EnsemblPlants:AT4G11460EnsemblPlants:AT4G11460.1
entrez:826751Gene3D:2.60.120.200GeneID:826751Genevisible:Q9LDT0
GO:GO:0004674GO:GO:0005524GO:GO:0005886GO:GO:0006468
GO:GO:0009506GO:GO:0016021GO:GO:0042742Gramene:AT4G11460.1
hmmpanther:PTHR27002HOGENOM:HOG000116550InParanoid:Q9LDT0InterPro:IPR000719
InterPro:IPR001245InterPro:IPR002902InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441iPTMnet:Q9LDT0KEGG:ath:AT4G11460
OMA:RDHQTEDPaxDb:Q9LDT0Pfam:PF01657Pfam:PF07714
Pfam:Q9LDT0Pfscan:PS50011Pfscan:PS51473PhylomeDB:Q9LDT0
PIR:T10566PRIDE:Q9LDT0PRO:PR:Q9LDT0PROSITE:PS00107
PROSITE:PS00108PROSITE:PS50011PROSITE:PS51473ProteinModelPortal:Q9LDT0
Proteomes:UP000006548RefSeq:NP_192885.1scanprosite:PS00107scanprosite:PS00108
SMART:SM00220SMR:Q9LDT0STRING:3702.AT4G11460.1SUPFAM:SSF56112
TAIR:AT4G11460tair10-symbols:CRK30TMHMM:TMhelixUniGene:At.54274
UniProt:Q9LDT0
Coordinates (TAIR10) chr4:+:6964468..6967093
Molecular Weight (calculated) 77804.10 Da
IEP (calculated) 6.97
GRAVY (calculated) -0.13
Length 700 amino acids
Sequence (TAIR10)
(BLAST)
001: MRQNNLFSLI FWLVPVSLII VVSAQLCSEK FGTFTPGGTF DKNRRIILSS LPSEVTAQDG FYNASIGTDP DQLYAMGMCI PGAKQKLCRD CIMDVTRQLI
101: QTCPNQTAAI HWSGGGKTVC MARYYNQPSS RPLDLESVSI GYNVGNLSTN LTDFDRLWER LIAHMVTKAS SASIKYLSFD NSRFYAADET NLTNSQMVYA
201: LMQCTPDVSP SNCNTCLKQS VDDYVGCCHG KQGGYVYRPS CIFRWDLYPF NGAFDLLTLA PPPSSQLQSP PPVTNKDEKT IHTGTIIGIV IVVAMVIIMA
301: LLALGVSVCR SRKKYQAFAS ETADDITTVG YLQFDIKDIE AATSNFLASN KIGQGGFGEV YKGTLSNGTE VAVKRLSRTS DQGELEFKNE VLLVAKLQHR
401: NLVRLLGFAL QGEEKILVFE FVPNKSLDYF LFGSTNPTKK GQLDWTRRYN IIGGITRGLL YLHQDSRLTI IHRDIKASNI LLDADMNPKI ADFGMARNFR
501: DHQTEDSTGR VVGTFGYMPP EYVAHGQFST KSDVYSFGVL ILEIVSGRKN SSFYQMDGSV CNLVTYVWRL WNTDSSLELV DPAISGSYEK DEVTRCIHIG
601: LLCVQENPVN RPALSTIFQM LTNSSITLNV PQPPGFFFRN RPESDTLRRG LEPDQYNNES VTCSIDNATI TTLLGKTLAS ALCCITSTLF SKSMYRNTED
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)