AT1G66940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.998 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : protein kinase-related | ||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
protein kinase-related; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G67000.1); Has 305 Blast hits to 263 proteins in 13 species: Archae - 0; Bacteria - 0; Metazoa - 4; Fungi - 0; Plants - 301; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:24973201..24974684 | ||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 36660.00 Da | ||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.87 | ||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||
| Length | 332 amino acids | ||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MYHLPTSCLV IFFLLSLFHP LPCDSSNQGL GWCETLFQCG NITAGFPFSG GNRHKECGHP SLELHCNKNN ITSLFISNQK YSVLRIDQTS NTLTLAKQNL 101: LGSFCSSVFT NTTLPPETFE LSRTYKSVTI FYQCSSVLPN LSSYTCPEIG PISVSESPEK YPESCRSSFT VKVPTSFDTK EKELNVTNLE SVLRKGFEVT 201: VVINENTCQE CLSSLGRCHV FNENLTPGVK CRPPSDSEGS CGYNQTSSTF LCYCKDPYSL SCSSGKSNIR WIIGGVLILI LIVSGIIVSL VFLCLCCRAK 301: IVRKKKSSDA LEVPPRPIKE SPTLSEDIKA RT |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)