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AT3G21530.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : DNAse I-like superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
DNAse I-like superfamily protein; FUNCTIONS IN: hydrolase activity; INVOLVED IN: biological_process unknown; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Endonuclease/exonuclease/phosphatase (InterPro:IPR005135); BEST Arabidopsis thaliana protein match is: DNAse I-like superfamily protein (TAIR:AT2G48030.1); Has 250 Blast hits to 250 proteins in 102 species: Archae - 0; Bacteria - 169; Metazoa - 0; Fungi - 2; Plants - 38; Viruses - 0; Other Eukaryotes - 41 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410JRZCeggNOG:ENOG4111HENEMBL:AB019232EMBL:AK176730
EMBL:CP002686EnsemblPlants:AT3G21530EnsemblPlants:AT3G21530.1entrez:821707
Gene3D:3.60.10.10GeneID:821707Gramene:AT3G21530.1hmmpanther:PTHR14859
hmmpanther:PTHR14859:SF2HOGENOM:HOG000240069InterPro:IPR005135InterPro:IPR027317
KEGG:ath:AT3G21530ncoils:CoilOMA:GDESPHIPANTHER:PTHR14859
Pfam:PF03372PhylomeDB:Q9LVF3Proteomes:UP000006548RefSeq:NP_188790.2
SUPFAM:SSF56219TAIR:AT3G21530UniGene:At.50211UniGene:At.66548
UniProt:Q9LVF3
Coordinates (TAIR10) chr3:-:7582828..7584448
Molecular Weight (calculated) 52028.60 Da
IEP (calculated) 9.85
GRAVY (calculated) -0.40
Length 458 amino acids
Sequence (TAIR10)
(BLAST)
001: MLCVFRRKLG CLFSRLRWVI KKRVRARVIV RRFRKARWRA RRKESPESEV SSIHLSSNSG RHIRVATFNV AMFSLAPVVQ TMEETAFLGH LDSSNITCPS
101: PKGILKQSPL HSSAVRKPKV CINLPDNEIS LAQSYSFLSM VENDNDGKEN RGSLSMRSPV CLPSCWWDQE SFNGYSSRRS IAELLRELDA DILALQDVKA
201: EEETLMKPLS DLASALGMKY VFAESWAPEY GNAILSKWPI KKWRVQRIAD VDDFRNVLKV TVEIPWAGDV NVYCTQLDHL DENWRMKQID AITRGDESPH
301: ILLGGLNSLD GSDYSIARWN HIVKYYEDSG KPTPRVEVMR FLKGKGYLDS KEFAGECEPV VIIAKGQNVQ GTCKYGTRVD YILASPESPY EFVPGSYSVV
401: SSKGTSDHHI VKVDLVITKE RSRGNFKHSR KKAKQKIFQI KANLMSKDTW KLGNLMSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)