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AT1G70250.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : receptor serine/threonine kinase, putative
Curator
Summary (TAIR10)
Encodes a Protease inhibitor/seed storage/LTP family protein
Computational
Description (TAIR10)
receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0515eggNOG:KOG1187EMBL:CP002684EnsemblPlants:AT1G70250
EnsemblPlants:AT1G70250.1entrez:843361Gene3D:2.60.110.10Gene3D:2.60.120.200
GeneID:843361GO:GO:0004674GO:GO:0005524Gramene:AT1G70250.1
hmmpanther:PTHR27009hmmpanther:PTHR27009:SF21InParanoid:F4I5D4InterPro:IPR000719
InterPro:IPR001245InterPro:IPR001938InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR016140InterPro:IPR017441InterPro:IPR017949
KEGG:ath:AT1G70250OMA:ICKRTIYPaxDb:F4I5D4Pfam:PF00314
Pfam:PF07714Pfam:PF14368Pfscan:PS50011Pfscan:PS51367
PRIDE:F4I5D4PRINTS:PR00347PROSITE:PS00107PROSITE:PS00108
PROSITE:PS00316PROSITE:PS50011PROSITE:PS51367ProteinModelPortal:F4I5D4
Proteomes:UP000006548RefSeq:NP_177182.2scanprosite:PS00107scanprosite:PS00108
scanprosite:PS00316SMART:SM00205SMART:SM00220SMR:F4I5D4
STRING:3702.AT1G70250.1SUPFAM:SSF47699SUPFAM:SSF49870SUPFAM:SSF56112
TAIR:AT1G70250UniGene:At.50021UniProt:F4I5D4
Coordinates (TAIR10) chr1:+:26452975..26456088
Molecular Weight (calculated) 87513.30 Da
IEP (calculated) 6.42
GRAVY (calculated) -0.10
Length 799 amino acids
Sequence (TAIR10)
(BLAST)
001: MTTAMMIFAV LVTVVEVEAQ TECVSKIVPC FRFLNTTTKP STDCCNSIKE AMEKDFSCLC TIYNTPGLLA QFNITTDQAL GLNLRCGVNT DLSACSGSGA
101: PPPPPDLFPP PSAQMLPPPP ASSPAPPSPP SSSRPRPLPR PSMSRSFTIE NKCQYTIWPA TYGYRRSLET TGFVLEKGET RTIKAPSSWI GRFWGRTLCS
201: TNSTGGFSCA TGDCTSGKIK CLGIPIDPTT VVEFNLASYG VDYYVVNVFN GYNLPLLVTP ENKNCRSIEC VIDMNETCPS ELMVNSSGLG SHHPIACMTT
301: CQRYQLPELC CIGLSSGVVV PPGICKRTIY SRTFNNVCPS AYSYAYDVDN SSFTCPNFSN FVITFCPSSS TVPEAGNINS STVPEAGNIK TGTEAKGNIP
401: LRLKLILGVS SVLATMIIIV IVGKVRANNM RKSDLNEKNM EAVVMLKRFS YVQVKKMTKS FENVLGKGGF GTVYKGKLPD GSRDVAVKIL KESNEDGEDF
501: INEIASMSRT SHANIVSLLG FCYEGRKKAI IYELMPNGSL DKFISKNMSA KMEWKTLYNI AVGVSHGLEY LHSHCVSRIV HFDIKPQNIL IDGDLCPKIS
601: DFGLAKLCKN NESIISMLHA RGTIGYIAPE VFSQNFGGVS HKSDVYSYGM VVLEMIGARN IGRAQNAGSS NTSMYFPDWI YKDLEKGEIM SFLADQITEE
701: EDEKIVKKMV LVGLWCIQTN PYDRPPMSKV VEMLEGSLEA LQIPPKPLLC LPAITAPITV DEDIQETSSF LKPSQDTSYY SEQIVQDIVE ENQDSSRSS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)