AT1G70250.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : receptor serine/threonine kinase, putative | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a Protease inhibitor/seed storage/LTP family protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
receptor serine/threonine kinase, putative; FUNCTIONS IN: protein serine/threonine kinase activity, transmembrane receptor protein serine/threonine kinase activity, protein kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: endomembrane system; EXPRESSED IN: 20 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Bifunctional inhibitor/plant lipid transfer protein/seed storage (InterPro:IPR016140), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009), Protein kinase, catalytic domain (InterPro:IPR000719), Thaumatin, conserved site (InterPro:IPR017949), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Thaumatin, pathogenesis-related (InterPro:IPR001938); BEST Arabidopsis thaliana protein match is: PR5-like receptor kinase (TAIR:AT5G38280.1); Has 125965 Blast hits to 120508 proteins in 4304 species: Archae - 146; Bacteria - 13220; Metazoa - 45235; Fungi - 10956; Plants - 36891; Viruses - 1019; Other Eukaryotes - 18498 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:26452975..26456088 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 87513.30 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.42 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 799 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MTTAMMIFAV LVTVVEVEAQ TECVSKIVPC FRFLNTTTKP STDCCNSIKE AMEKDFSCLC TIYNTPGLLA QFNITTDQAL GLNLRCGVNT DLSACSGSGA 101: PPPPPDLFPP PSAQMLPPPP ASSPAPPSPP SSSRPRPLPR PSMSRSFTIE NKCQYTIWPA TYGYRRSLET TGFVLEKGET RTIKAPSSWI GRFWGRTLCS 201: TNSTGGFSCA TGDCTSGKIK CLGIPIDPTT VVEFNLASYG VDYYVVNVFN GYNLPLLVTP ENKNCRSIEC VIDMNETCPS ELMVNSSGLG SHHPIACMTT 301: CQRYQLPELC CIGLSSGVVV PPGICKRTIY SRTFNNVCPS AYSYAYDVDN SSFTCPNFSN FVITFCPSSS TVPEAGNINS STVPEAGNIK TGTEAKGNIP 401: LRLKLILGVS SVLATMIIIV IVGKVRANNM RKSDLNEKNM EAVVMLKRFS YVQVKKMTKS FENVLGKGGF GTVYKGKLPD GSRDVAVKIL KESNEDGEDF 501: INEIASMSRT SHANIVSLLG FCYEGRKKAI IYELMPNGSL DKFISKNMSA KMEWKTLYNI AVGVSHGLEY LHSHCVSRIV HFDIKPQNIL IDGDLCPKIS 601: DFGLAKLCKN NESIISMLHA RGTIGYIAPE VFSQNFGGVS HKSDVYSYGM VVLEMIGARN IGRAQNAGSS NTSMYFPDWI YKDLEKGEIM SFLADQITEE 701: EDEKIVKKMV LVGLWCIQTN PYDRPPMSKV VEMLEGSLEA LQIPPKPLLC LPAITAPITV DEDIQETSSF LKPSQDTSYY SEQIVQDIVE ENQDSSRSS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)