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AT4G36470.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
nucleus 0.998
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-adenosyl-L-methionine-dependent methyltransferases superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-adenosyl-L-methionine-dependent methyltransferases superfamily protein; CONTAINS InterPro DOMAIN/s: SAM dependent carboxyl methyltransferase (InterPro:IPR005299); BEST Arabidopsis thaliana protein match is: S-adenosyl-L-methionine-dependent methyltransferases superfamily protein (TAIR:AT3G11480.1); Has 909 Blast hits to 891 proteins in 125 species: Archae - 0; Bacteria - 69; Metazoa - 9; Fungi - 5; Plants - 730; Viruses - 0; Other Eukaryotes - 96 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G36470-MONOMEReggNOG:ENOG410IF8HeggNOG:ENOG4111GV5EMBL:AK226652
EMBL:AL161589EMBL:BT014888EMBL:CP002687EMBL:Z99708
EnsemblPlants:AT4G36470EnsemblPlants:AT4G36470.1entrez:829799Gene3D:3.40.50.150
GeneID:829799GO:GO:0008757Gramene:AT4G36470.1hmmpanther:PTHR31009
hmmpanther:PTHR31009:SF9HOGENOM:HOG000238197InterPro:IPR005299InterPro:IPR029063
KEGG:ath:AT4G36470OMA:AKSDEWGPfam:PF03492PhylomeDB:O23234
PIR:E85430Proteomes:UP000006548RefSeq:NP_195365.1SMR:O23234
STRING:3702.AT4G36470.1SUPFAM:SSF53335TAIR:AT4G36470UniGene:At.50402
UniProt:O23234
Coordinates (TAIR10) chr4:-:17215128..17216475
Molecular Weight (calculated) 41986.90 Da
IEP (calculated) 5.34
GRAVY (calculated) -0.39
Length 371 amino acids
Sequence (TAIR10)
(BLAST)
001: MDKKDMEREF YMTGGDGKTS YARNSSLQKK ASDTAKHITL ETLQQLYKET RPKSLGIADL GCSSGPNTLS TITDFIKTVQ VAHHREIPIQ PLPEFSIFLN
101: DLPGNDFNFI FKSLPDFHIE LKRDNNNGDC PSVFIAAYPG SFYGRLFPEN TIHFVYASHS LHWLSKVPTA LYDEQGKSIN KGCVSICSLS SEAVSKAYCS
201: QFKEDFSIFL RCRSKEMVSA GRMVLIILGR EGPDHVDRGN SFFWELLSRS IADLVAQGET EEEKLDSYDM HFYAPSADEI EGEVDKEGSF ELERLEMLEV
301: KKDKGNTEGD ISYGKAVAKT VRAVQESMLV QHFGEKILDK LFDTYCRMVD DELAKEDIRP ITFVVVLRKK L
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)