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AT4G10500.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 0.975
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein; FUNCTIONS IN: oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors, oxidoreductase activity; INVOLVED IN: secondary metabolic process; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 9 growth stages; CONTAINS InterPro DOMAIN/s: Oxoglutarate/iron-dependent oxygenase (InterPro:IPR005123); BEST Arabidopsis thaliana protein match is: 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein (TAIR:AT4G10490.1); Has 8560 Blast hits to 8509 proteins in 1005 species: Archae - 0; Bacteria - 1116; Metazoa - 115; Fungi - 958; Plants - 4983; Viruses - 0; Other Eukaryotes - 1388 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G10500-MONOMEREC:1.14.11.-EC:1.14.13.-eggNOG:COG3491
eggNOG:KOG0143EMBL:AF118222EMBL:AK176678EMBL:AK176911
EMBL:AL049524EMBL:AL161517EMBL:BT010537EMBL:CP002687
EnsemblPlants:AT4G10500EnsemblPlants:AT4G10500.1entrez:826642Gene3D:2.60.120.330
GeneID:826642GO:GO:0002229GO:GO:0002239GO:GO:0009617
GO:GO:0009620GO:GO:0009751GO:GO:0010150GO:GO:0046244
GO:GO:0046872GO:GO:0051213Gramene:AT4G10500.1gramene_pathway:1.14.11.9
gramene_pathway:PWY-5152gramene_pathway:PWY1F-823gramene_pathway:PWY1F-FLAVSYNhmmpanther:PTHR10209
hmmpanther:PTHR10209:SF196HOGENOM:HOG000276735IntAct:Q9ZSA8InterPro:IPR005123
InterPro:IPR026992InterPro:IPR027443KEGG:ath:AT4G10500OMA:LESDHIS
PaxDb:Q9ZSA8Pfam:PF03171Pfam:PF14226Pfscan:PS51471
PhylomeDB:Q9ZSA8PIR:T04185PROSITE:PS51471ProteinModelPortal:Q9ZSA8
Proteomes:UP000006548RefSeq:NP_192788.1SMR:Q9ZSA8STRING:3702.AT4G10500.1
SUPFAM:SSF51197TAIR:AT4G10500UniGene:At.33626UniProt:Q9ZSA8
Coordinates (TAIR10) chr4:+:6491089..6492342
Molecular Weight (calculated) 39236.30 Da
IEP (calculated) 5.73
GRAVY (calculated) -0.21
Length 349 amino acids
Sequence (TAIR10)
(BLAST)
001: MATSAISKLL VSDFASSVHI PSNYVRPISD RPNLSEVESS GDSIPLIDLR DLHGPNRAVI VQQLASACST YGFFQIKNHG VPDTTVNKMQ TVAREFFHQP
101: ESERVKHYSA DPTKTTRLST SFNVGADKVL NWRDFLRLHC FPIEDFIEEW PSSPISFREV TAEYATSVRA LVLRLLEAIS ESLGLESDHI SNILGKHAQH
201: MAFNYYPPCP EPELTYGLPG HKDPTVITVL LQDQVSGLQV FKDDKWVAVS PIPNTFIVNI GDQMQVISND KYKSVLHRAV VNTENERLSI PTFYFPSTDA
301: VIGPAHELVN EQDSLAIYRT YPFVEYWDKF WNRSLATASC LDAFKAPTT
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)