AT5G09290.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:cytosol 0.616 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Inositol monophosphatase family protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Inositol monophosphatase family protein; FUNCTIONS IN: 3'(2'),5'-bisphosphate nucleotidase activity, inositol or phosphatidylinositol phosphatase activity; INVOLVED IN: sulfur metabolic process; EXPRESSED IN: 6 plant structures; EXPRESSED DURING: LP.06 six leaves visible, LP.04 four leaves visible, 4 anthesis; CONTAINS InterPro DOMAIN/s: Inositol monophosphatase (InterPro:IPR000760), 3(2),5 -bisphosphate nucleotidase HAL2 (InterPro:IPR006239), Inositol monophosphatase, metal-binding site (InterPro:IPR020583); BEST Arabidopsis thaliana protein match is: Inositol monophosphatase family protein (TAIR:AT5G64000.1); Has 10680 Blast hits to 10676 proteins in 1898 species: Archae - 61; Bacteria - 6716; Metazoa - 401; Fungi - 268; Plants - 330; Viruses - 0; Other Eukaryotes - 2904 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr5:+:2882434..2884098 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 37491.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.06 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.28 | ||||||||||||||||||||||||||||||||||||||||
| Length | 345 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MPYEKELAAA KKAVSLAARL SQEVQKSLLQ SDVRSKSDKS PVTAADYGSQ AVISHVLERE LHPEPLYLVA EENAEDLHKN GAEEFLESIT KLVNNALASD 101: DSYANSSLSM DDVRKAIDHG RSQGGSSGRH WILDPVDGTR GFVKGEEYAV ALALLVEGKV VLGVMACPKL ENHKSSSSGC LFFATVGEGA YVQSLEGDSH 201: PPQKVQVSNI ENPEEATFVE SSHKPIPIHS SIANKLGIKA PPLRIHSQVK YAALARGDAE IYLRFTLKGY REFIWNHAAG AIITTEAGGV VCDADGNPLD 301: FSRGNHLEHK TGIVVSTKNL MPRLLKAIRE SIEEEMLLSE TQLKL |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)