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AT1G09932.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
cytosol 1.000
ASURE: cytosol
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Phosphoglycerate mutase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Phosphoglycerate mutase family protein; CONTAINS InterPro DOMAIN/s: Histidine phosphatase superfamily, clade-1 (InterPro:IPR013078); BEST Arabidopsis thaliana protein match is: Phosphoglycerate mutase family protein (TAIR:AT2G17280.2); Has 552 Blast hits to 552 proteins in 105 species: Archae - 0; Bacteria - 9; Metazoa - 0; Fungi - 272; Plants - 167; Viruses - 0; Other Eukaryotes - 104 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111QJYeggNOG:KOG4754EMBL:AK118857EMBL:BT005568
EMBL:CP002684EnsemblPlants:AT1G09932EnsemblPlants:AT1G09932.1entrez:837526
ExpressionAtlas:Q8GWG7Gene3D:3.40.50.1240GeneID:837526Gramene:AT1G09932.1
hmmpanther:PTHR23029hmmpanther:PTHR23029:SF47HOGENOM:HOG000006417InterPro:IPR013078
InterPro:IPR029033OMA:PEIDFTMPfam:PF00300PhylomeDB:Q8GWG7
Proteomes:UP000006548RefSeq:NP_849628.1SMART:SM00855STRING:3702.AT1G09932.1
SUPFAM:SSF53254TAIR:AT1G09932UniGene:At.59198UniProt:Q8GWG7
Coordinates (TAIR10) chr1:-:3230716..3233027
Molecular Weight (calculated) 29669.60 Da
IEP (calculated) 6.35
GRAVY (calculated) -0.33
Length 260 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLCGTQMLR LSSPHFKTLH LVRHAQGVHN IALEEKGEKP ESEKLFDAHL SPKGLQQVSE RRNQILESGL LNTVELVITS PLCRAMETSI GIFRGQGYVN
101: ISEDFAKANN FPPIVALEIC RERMGLYPCD RRASISTRRT FFPEIDFTMI ESDEDALWQD KEREKLEDVA TRGLHFVKWL WERPEKEIAI VSHGIFLQQT
201: LCALHGKVGI PLEDSLLTRF ANCELRSIRI EKSDMEADTL MTCNCRNYVT PPSTSFHSHA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)