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AT3G13100.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:22550958 (2012): plastid
  • PMID:17151019 (2007): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : multidrug resistance-associated protein 7
Curator
Summary (TAIR10)
member of MRP subfamily
Computational
Description (TAIR10)
multidrug resistance-associated protein 7 (MRP7); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: response to other organism; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 8 (TAIR:AT3G13090.1); Has 650648 Blast hits to 350565 proteins in 4050 species: Archae - 11697; Bacteria - 531445; Metazoa - 11792; Fungi - 6984; Plants - 5983; Viruses - 13; Other Eukaryotes - 82734 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G13100-MONOMEREC:3.6.3.44eggNOG:COG1132eggNOG:KOG0054
EMBL:AJ507129EMBL:AP000375EMBL:CP002686EnsemblPlants:AT3G13100
EnsemblPlants:AT3G13100.1entrez:820498Gene3D:3.40.50.300GeneID:820498
Genevisible:Q9LK62GO:GO:0005524GO:GO:0005774GO:GO:0008559
GO:GO:0016021GO:GO:0042626GO:GO:0051707Gramene:AT3G13100.1
hmmpanther:PTHR24223hmmpanther:PTHR24223:SF181InParanoid:Q9LK62InterPro:IPR003439
InterPro:IPR003593InterPro:IPR011527InterPro:IPR017871InterPro:IPR027417
iPTMnet:Q9LK62KEGG:ath:AT3G13100OMA:VECQARRPaxDb:Q9LK62
Pfam:PF00005Pfam:PF00664Pfam:Q9LK62Pfscan:PS50893
Pfscan:PS50929PhylomeDB:Q9LK62PRIDE:Q9LK62PRO:PR:Q9LK62
PROSITE:PS00211PROSITE:PS50893PROSITE:PS50929ProteinModelPortal:Q9LK62
Proteomes:UP000006548Reactome:R-ATH-382556RefSeq:NP_187917.3scanprosite:PS00211
SMART:SM00382SMR:Q9LK62STRING:3702.AT3G13100.1SUPFAM:SSF52540
SUPFAM:SSF90123TAIR:AT3G13100tair10-symbols:ABCC7tair10-symbols:ATMRP7
tair10-symbols:MRP7TMHMM:TMhelixUniGene:At.39492UniProt:Q9LK62
Coordinates (TAIR10) chr3:-:4208859..4214173
Molecular Weight (calculated) 167814.00 Da
IEP (calculated) 6.92
GRAVY (calculated) 0.14
Length 1493 amino acids
Sequence (TAIR10)
(BLAST)
0001: MKQSYAMDNP IVFFLLESNY FPMFSIFFNL LLLLVMFGSC VYKKRLGWEN SDAFTNERFK DMSLTYNKLV VICCETLSAL NSVLLLLSCF NLHKNGWDRS
0101: ELMILLDLLF TALSWGAISF YIRSQFTYSH DQKFPILLRV WWVLYFMFSC YRLLVDIALY KKQELVSVHL LLSDVLAVSV GLFLCYSCLQ KQGQGERINL
0201: LLEEPLLNGA ESSAATSVQL DKAEDDEVVT PFSNAGFLSH VSFSWMSPLI VLGNEKIIDS EDVPQVDNSD RAEKLFWIFR SKLEWDDGER RITTYKLIKA
0301: LFFSVWRDIL LSTLFAFVYT VSCYVAPYLM DTFVQYLNGQ RQYSNQGVVL VTTFFVAKLV ECQARRNWYF RLQKAGIGMR SVLVSMIYEK GLTLPCYSKQ
0401: GHTSGEIINL MTVDAERISA FSWYMHDPWI LVLQISLALL ILYRSLGLGS IAAFAATFLV MLGNIPLAKL EEKFQGNLME SKDNRMKKTS EALLNMRILK
0501: LQGWEMKFLH KILDLRGIEA GWLKKFVYNS AAISSVLWAA PSFVSATAFG ACMLLKIPLE SGKIIAALAT FRILQTPIYK LPDTISMIVQ TKVSLDRIAT
0601: FLCLDDLQQD GMERLPSGSS KMDVEVSNGA FSWDDSSPIP TLKDIRFKIP HGMNIAICGT VGSGKSSLLS SILGEVPKIS GNLKVCGRKA YIAQSPWIQS
0701: GKVEENILFG KPMQREWYQR VLEACSLNKD LEVFPFRDQT VIGERGINLS GGQKQRIQIA RALYQDADIY LFDDPFSAVD AHTGSHLFKE VLLGLLRNKT
0801: VIYVTHQLEF LPEADLILVM KDGRITQAGK YNEILESGTD FMELVGAHTD ALAAVDSYEK GSASAQSTTS KESKVSNDEE KQEEDLPSPK GQLVQEEERE
0901: KGKVGFTVYQ KYMKLAYGGA LVPIILVVQI LFQVLNIGSN YWMAWVTPVS KDVKPLVSGS TLILVYVFLA TASSFCILVR AMLSAMTGFK IATELFNQMH
1001: FRIFRASMSF FDATPIGRIL NRASTDQSAV DLRLPSQFSN LAIAAVNILG IIGVMGQVAW QVLIVFIPVI AACTWYRQYY ISAARELARL SGISRSPLVQ
1101: HFSETLSGIT TIRSFDQEPR FRTDIMRLND CYSRLRFHAI SAMEWLCFRL DLLSTVAFAL SLVILVSVPE GVINPSFAGL AVTYALNLNS LQATLIWTLC
1201: DLENKMISVE RMLQYIDIPS EPSLVIESTR PEKSWPCRGE ITICNLQVRY GPHLPMVLRG LTCTFRGGLK TGIVGRTGCG KSTLIQTLFR IVEPAAGEIR
1301: IDGINILTIG LHDLRSRLSI IPQEPTMFEG TVRSNLDPLE EYADDQIWEA LDKCQLGDEI RKKELKLDSP VSENGQNWSV GQRQLVCLGR VLLKRSKVLI
1401: LDEATASVDT ATDTLIQETL RQHFSGCTVI TIAHRISSVI DSDMVLLLDQ GLIEEHDSPA RLLEDKSSSF SKLVAEYTAS SDSRFKRSSM KTN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)