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AT3G13090.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
vacuole 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:23903016 (2013): plant-type vacuole plant-type vacuole membrane
  • PMID:17151019 (2007): plant-type vacuole
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : multidrug resistance-associated protein 8
Curator
Summary (TAIR10)
member of MRP subfamily
Computational
Description (TAIR10)
multidrug resistance-associated protein 8 (MRP8); FUNCTIONS IN: ATPase activity, coupled to transmembrane movement of substances; INVOLVED IN: transport, transmembrane transport; LOCATED IN: plasma membrane; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: 6 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA+ type, core (InterPro:IPR003593), ABC transporter-like (InterPro:IPR003439), ABC transporter, transmembrane domain, type 1 (InterPro:IPR011527), ABC transporter integral membrane type 1 (InterPro:IPR017940), ABC transporter, transmembrane domain (InterPro:IPR001140), ABC transporter, conserved site (InterPro:IPR017871); BEST Arabidopsis thaliana protein match is: multidrug resistance-associated protein 7 (TAIR:AT3G13100.1); Has 618731 Blast hits to 341231 proteins in 4024 species: Archae - 11229; Bacteria - 503340; Metazoa - 11410; Fungi - 6818; Plants - 5765; Viruses - 13; Other Eukaryotes - 80156 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G13090-MONOMERBioGrid:5831EC:3.6.3.44eggNOG:COG1132
eggNOG:KOG0054EMBL:AP000375EMBL:AY052368EMBL:CP002686
EnsemblPlants:AT3G13090EnsemblPlants:AT3G13090.1entrez:820497Gene3D:3.40.50.300
GeneID:820497Genevisible:Q8VZZ4GO:GO:0005524GO:GO:0005774
GO:GO:0008559GO:GO:0009506GO:GO:0016021GO:GO:0042626
Gramene:AT3G13090.1hmmpanther:PTHR24223hmmpanther:PTHR24223:SF181InParanoid:Q8VZZ4
InterPro:IPR003439InterPro:IPR003593InterPro:IPR011527InterPro:IPR017871
InterPro:IPR027417iPTMnet:Q8VZZ4KEGG:ath:AT3G13090MINT:MINT-8060430
OMA:ISQRGQFPaxDb:Q8VZZ4Pfam:PF00005Pfam:PF00664
Pfam:Q8VZZ4Pfscan:PS50893Pfscan:PS50929PRIDE:Q8VZZ4
PRO:PR:Q8VZZ4PROSITE:PS00211PROSITE:PS50893PROSITE:PS50929
ProteinModelPortal:Q8VZZ4Proteomes:UP000006548Reactome:R-ATH-382556RefSeq:NP_187916.3
scanprosite:PS00211SMART:SM00382SMR:Q8VZZ4STRING:3702.AT3G13090.1
SUPFAM:SSF52540SUPFAM:SSF90123TAIR:AT3G13090tair10-symbols:ABCC6
tair10-symbols:ATMRP8tair10-symbols:MRP8TMHMM:TMhelixUniGene:At.28307
UniProt:Q8VZZ4
Coordinates (TAIR10) chr3:-:4203013..4208171
Molecular Weight (calculated) 164377.00 Da
IEP (calculated) 6.88
GRAVY (calculated) 0.19
Length 1466 amino acids
Sequence (TAIR10)
(BLAST)
0001: MENPIDSLLL QPIYLSVLSF FLNLVLLLIL FGSWLFKKRV ACEDTDAIMN EEFKHISFSY NKLVLICCVS LSVFYSVLSL LSCLHWHTNG WPFLDLLLAA
0101: LTWGSISVYL FGRYTNSCEQ KVLFLLRVWW VFFFVVSCYH LVVDFVLYKK QEMVSVHFVI SDLVGVCAGL FLCCSCLWKK GEGERIDLLK EPLLSSAESS
0201: DNEEVTAPFS KAGILSRMSF SWMSPLITLG NEKIIDIKDV PQLDRSDTTE SLFWIFRSKL EWDDGERRIT TFKLIKALFL SVWRDIVLSA LLAFVYTVSC
0301: YVAPYLMDNF VQYLNGNRQY KNQGYVLVTT FFVAKLVECQ TQRQWFFRGQ KAGLGMRSVL VSMIYEKGLT LPCHSKQGHT SGEIINLMAV DADRISAFSW
0401: FMHDPWILVL QVSLALWILY KSLGLGSIAA FPATILVMLA NYPFAKLEEK FQSSLMKSKD NRMKKTSEVL LNMKILKLQG WEMKFLSKIL ELRHIEAGWL
0501: KKFVYNSSAI NSVLWAAPSF ISATAFGACL LLKIPLESGK ILAALATFRI LQGPIYKLPE TISMIVQTKV SLNRIASFLC LDDLQQDVVG RLPSGSSEMA
0601: VEISNGTFSW DDSSPIPTLR DMNFKVSQGM NVAICGTVGS GKSSLLSSIL GEVPKISGNL KVCGRKAYIA QSPWIQSGKV EENILFGKPM EREWYDRVLE
0701: ACSLNKDLEI LPFHDQTVIG ERGINLSGGQ KQRIQIARAL YQDADIYLFD DPFSAVDAHT GSHLFKEVLL GLLRHKTVIY VTHQVEFLPE ADLILVMKDG
0801: KITQAGKYHE ILDSGTDFME LVGAHTEALA TIDSCETGYA SEKSTTDKEN EVLHHKEKQE NGSDNKPSGQ LVQEEEREKG KVGFTVYKKY MALAYGGAVI
0901: PLILVVQVLF QLLSIGSNYW MTWVTPVSKD VEPPVSGFTL ILVYVLLAVA SSFCILIRAL LVAMTGFKMA TELFTQMHLR IFRASMSFFD ATPMGRILNR
1001: ASTDQSVADL RLPGQFAYVA IAAINILGII GVIVQVAWQV LIVFIPVVAA CAWYRQYYIS AARELARLAG ISRSPVVHHF SETLSGITTI RSFDQEPRFR
1101: GDIMRLSDCY SRLKFHSTGA MEWLCFRLEL LSTFAFASSL VILVSAPEGV INPSLAGLAI TYALNLNTLQ ATLIWTLCDL ENKMISVERM LQYTNIPSEP
1201: PLVIETTRPE KSWPSRGEIT ICNLQVRYGP HLPMVLHGLT CTFPGGLKTG IVGRTGCGKS TLIQTLFRIV EPAAGEIRID GINILSIGLH DLRSRLSIIP
1301: QDPTMFEGTI RSNLDPLEEY TDDQIWEALD NCQLGDEVRK KELKLDSPVS ENGQNWSVGQ RQLVCLGRVL LKRSKLLVLD EATASIDTAT DNLIQETLRH
1401: HFADCTVITI AHRISSVIDS DMVLLLDQGL IKEHDSPARL LEDRSSLFSK LVAEYTTSSE SKSKRS
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)