AT4G02725.1::SUBA5

AT4G02725.1

Subcellular Consensus
(Prediction and Experimental)

min:

:max

SUBAcon:
plastid 1.000
What is SUBAcon?

Predictors

External Curations

AmiGO : plastid 18431481
TAIR : plastid 18431481

Experimental Localisations and PPI

FP	MS/MS	PPI
	PMID:31975158 (2020): plastid PMID:31932409 (2020): plastid PMID:31615849 (2019): plastid plastid thylakoid PMID:30135097 (2018): plastid PMID:29967049 (2018): plastid PMID:27137770 (2016): plastid plastid stroma PMID:24872594 (2014): plastid plastid thylakoid PMID:24124904 (2013): plastid PMID:23673981 (2013): plastid plastid stroma plastoglobules PMID:21531424 (2011): plastid PMID:20061580 (2010): plastid plastid thylakoid PMID:18431481 (2008): plastid	PMID:24833385 (2014): AT3G12180.1:None: PMID:24833385 (2014): AT2G26180.1:None: PMID:24833385 (2014): AT3G48260.1:None: PMID:24833385 (2014): AT3G66654.1:None: PMID:24833385 (2014): AT1G31812.1:None: PMID:24833385 (2014): AT1G75820.1:None: PMID:24833385 (2014): AT4G38690.1:None: PMID:21798944 (2011): AT3G50910.1:None: PMID:21798944 (2011): AT5G22290.1:None: PMID:21798944 (2011): AT1G27300.1:None: PMID:21798944 (2011): AT4G19030.1:Y2H: PMID:21798944 (2011): AT4G35580.1:Y2H:

SUBAcon links
AGI-AGI relationships

Coexpression	PPI
AT2G44650.1 plastid [6.13] AT1G67280.1 plastid [5.73] AT4G12060.1 plastid [5.71] AT5G52960.1 plastid [5.5] AT1G35680.1 plastid [5.44] AT1G78915.1 plastid [5.44] AT5G14910.1 plastid [5.28] AT5G45390.1 plastid [5.1] AT4G08280.1 mitochondrion [5.08] AT3G60370.1 plastid [5.0]	AT1G31812.1 cytosol AT3G12180.1 endoplasmic reticulum AT1G27300.1 golgi AT3G66654.1 golgi AT2G26180.1 nucleus AT3G48260.1 nucleus AT4G35580.1 nucleus AT5G22290.1 nucleus AT3G50910.1 mitochondrion, nucleus AT1G75820.1 plasma membrane AT4G19030.1 plasma membrane AT4G38690.1 plasma membrane

Description (TAIR10)

protein_coding :

Curator
Summary (TAIR10)

Computational
Description (TAIR10)

unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast, membrane; Has 35333 Blast hits to 34131 proteins in 2444 species: Archae - 798; Bacteria - 22429; Metazoa - 974; Fungi - 991; Plants - 531; Viruses - 0; Other Eukaryotes - 9610 (source: NCBI BLink).

Protein Annotations

eggNOG:ENOG410IZRZ	eggNOG:ENOG410XW0Q	EMBL:BT015066	EMBL:BT015667
EMBL:CP002687	EnsemblPlants:AT4G02725	EnsemblPlants:AT4G02725.1	entrez:2745608
ExpressionAtlas:Q6DBF6	GeneID:2745608	GO:GO:0009507	GO:GO:0016021
Gramene:AT4G02725.1	hmmpanther:PTHR36046	HOGENOM:HOG000006095	IntAct:Q6DBF6
OMA:RREPKDS	PhylomeDB:Q6DBF6	Proteomes:UP000006548	RefSeq:NP_974503.1
STRING:3702.AT4G02725.1	TAIR:AT4G02725	TMHMM:TMhelix	UniGene:At.47912
UniProt:Q6DBF6

Coordinates (TAIR10)

chr4:+:1206055..1207290

Molecular Weight (calculated)

18797.60 Da

IEP (calculated)

9.06

GRAVY (calculated)

-0.15

Length

165 amino acids

Sequence (TAIR10)
(BLAST)

001: MASLSMSAVS LSPFRPQTEN LLSKLSFRTN LHSFNLKPIR ISTKVRSFGG NRREPKDSRF VDEKGVVDDM EGFLDNLSLE YDSVWDTKPS WCQPWTIMLT
101: GLSIVACSWV ILHSVIVSSL AVGVIGAWWY IFLYSYPKSY SEMIAERRKR VADGFEDIYG KNKPS