AT3G51740.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : inflorescence meristem receptor-like kinase 2 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
encodes a leucine-repeat receptor kinase expressed in inflorescence meristem. Locus association was made from performing sequence analysis with IMK3 (MRLK) whose locus association was provided by the authors. | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
inflorescence meristem receptor-like kinase 2 (IMK2); FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: transmembrane receptor protein tyrosine kinase signaling pathway, protein amino acid phosphorylation; LOCATED IN: cell wall, plasma membrane, membrane, plant-type cell wall; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Leucine-rich repeat-containing N-terminal domain, type 2 (InterPro:IPR013210), Leucine-rich repeat (InterPro:IPR001611), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: meristematic receptor-like kinase (TAIR:AT3G56100.1); Has 188484 Blast hits to 128319 proteins in 4033 species: Archae - 136; Bacteria - 17470; Metazoa - 63423; Fungi - 9529; Plants - 75715; Viruses - 437; Other Eukaryotes - 21774 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:19189248..19191842 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 90266.50 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.75 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.10 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 836 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MNHLYKNPFR IYEISFHFCA SLLLCFLLFS AQAVAGGGGG GHSWDGIVVT QANYQALQAI KHELIDFTGV LKSWNNSASS QVCSGWAGIK CLRGQVVAIQ 101: LPWKGLGGTI SEKIGQLGSL RKLSLHNNVI AGSVPRSLGY LKSLRGVYLF NNRLSGSIPV SLGNCPLLQN LDLSSNQLTG AIPPSLTEST RLYRLNLSFN 201: SLSGPLPVSV ARSYTLTFLD LQHNNLSGSI PDFFVNGSHP LKTLNLDHNR FSGAVPVSLC KHSLLEEVSI SHNQLSGSIP RECGGLPHLQ SLDFSYNSIN 301: GTIPDSFSNL SSLVSLNLES NHLKGPIPDA IDRLHNLTEL NLKRNKINGP IPETIGNISG IKKLDLSENN FTGPIPLSLV HLAKLSSFNV SYNTLSGPVP 401: PVLSKKFNSS SFLGNIQLCG YSSSNPCPAP DHHHPLTLSP TSSQEPRKHH HRKLSVKDVI LIAIGALLAI LLLLCCILLC CLIKKRAALK QKDGKDKTSE 501: KTVSAGVAGT ASAGGEMGGK LVHFDGPFVF TADDLLCATA EIMGKSTYGT AYKATLEDGN EVAVKRLREK TTKGVKEFEG EVTALGKIRH QNLLALRAYY 601: LGPKGEKLLV FDYMSKGSLS AFLHARGPET LIPWETRMKI AKGISRGLAH LHSNENMIHE NLTASNILLD EQTNAHIADY GLSRLMTAAA ATNVIATAGT 701: LGYRAPEFSK IKNASAKTDV YSLGIIILEL LTGKSPGEPT NGMDLPQWVA SIVKEEWTNE VFDLELMRET QSVGDELLNT LKLALHCVDP SPAARPEANQ 801: VVEQLEEIRP ETEVETETTP FGSGGEGGKD LGSNEE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)