AT3G20570.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : early nodulin-like protein 9 | ||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:7186754..7187453 | ||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 21511.20 Da | ||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 5.72 | ||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.16 | ||||||||||||||||||||||||||||||||||||||||
Length | 203 amino acids | ||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MARNLKSMML CGFGLLCFLM IVDRAYAREF TVGGATGWTV PSGSQVYSQW AEQSRFQIGD SLLFVYQSNQ DSVLQVTRDA YDSCNTDSPT AKFADGKTSV 101: TLNHSGPYYF ISGNKDNCKK NEKLVVIVMA DRSGNKNTAS SPPSPAPAPS GESAPSPPVS GTFEMTPAPT PTTSEDTPNS AASSLSFVAA LLGAALASTL 201: FLH |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)