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AT3G20570.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31673584 (2019): extracellular region plant-type cell wall
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:28818374 (2017): extracellular region plant-type cell wall
  • PMID:28155257 (2017): extracellular region plant-type cell wall
  • PMID:26572690 (2016): extracellular region plant-type cell wall
  • PMID:21109274 (2011): extracellular region
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : early nodulin-like protein 9
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
early nodulin-like protein 9 (ENODL9); FUNCTIONS IN: electron carrier activity, copper ion binding; LOCATED IN: anchored to membrane; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Plastocyanin-like (InterPro:IPR003245), Cupredoxin (InterPro:IPR008972); BEST Arabidopsis thaliana protein match is: early nodulin-like protein 14 (TAIR:AT2G25060.1); Has 1508 Blast hits to 1459 proteins in 80 species: Archae - 0; Bacteria - 15; Metazoa - 3; Fungi - 4; Plants - 1464; Viruses - 2; Other Eukaryotes - 20 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IYGReggNOG:ENOG410YPC9EMBL:AK228335EMBL:AP000410
EMBL:BT009716EMBL:CP002686EnsemblPlants:AT3G20570EnsemblPlants:AT3G20570.1
entrez:821604Gene3D:2.60.40.420GeneID:821604GO:GO:0009055
GO:GO:0031225GO:GO:0046658Gramene:AT3G20570.1hmmpanther:PTHR33021
hmmpanther:PTHR33021:SF60InterPro:IPR003245InterPro:IPR008972KEGG:ath:AT3G20570
OMA:FNDGHTVPfam:PF02298Pfscan:PS51485PhylomeDB:Q9LJU1
ProDom:PD003122PROSITE:PS51485Proteomes:UP000006548RefSeq:NP_566665.1
SMR:Q9LJU1STRING:3702.AT3G20570.1SUPFAM:SSF49503TAIR:AT3G20570
tair10-symbols:AtENODL9tair10-symbols:ENODL9UniGene:At.48682UniGene:At.5498
UniProt:Q9LJU1
Coordinates (TAIR10) chr3:-:7186754..7187453
Molecular Weight (calculated) 21511.20 Da
IEP (calculated) 5.72
GRAVY (calculated) -0.16
Length 203 amino acids
Sequence (TAIR10)
(BLAST)
001: MARNLKSMML CGFGLLCFLM IVDRAYAREF TVGGATGWTV PSGSQVYSQW AEQSRFQIGD SLLFVYQSNQ DSVLQVTRDA YDSCNTDSPT AKFADGKTSV
101: TLNHSGPYYF ISGNKDNCKK NEKLVVIVMA DRSGNKNTAS SPPSPAPAPS GESAPSPPVS GTFEMTPAPT PTTSEDTPNS AASSLSFVAA LLGAALASTL
201: FLH
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)