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AT4G35970.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
peroxisome 1.000
ASURE: peroxisome
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:31871212 (2020): mitochondrion
  • PMID:30961429 (2019): nucleus
  • PMID:28865150 (2017): extracellular region plant-type cell wall
  • PMID:21896887 (2011): mitochondrion mitochondrial envelope mitochondrial outer membrane
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : ascorbate peroxidase 5
Curator
Summary (TAIR10)
Encodes a microsomal ascorbate peroxidase APX5. Ascorbate peroxidases are enzymes that scavenge hydrogen peroxide in plant cells. Eight types of APX have been described for Arabidopsis: three cytosolic (APX1, APX2, APX6), two chloroplastic types (stromal sAPX, thylakoid tAPX), and three microsomal (APX3, APX4, APX5) isoforms.
Computational
Description (TAIR10)
ascorbate peroxidase 5 (APX5); FUNCTIONS IN: L-ascorbate peroxidase activity, peroxidase activity, heme binding; INVOLVED IN: oxidation reduction, response to oxidative stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Haem peroxidase (InterPro:IPR010255), Plant ascorbate peroxidase (InterPro:IPR002207), Peroxidases heam-ligand binding site (InterPro:IPR019793), Peroxidase, active site (InterPro:IPR019794), Haem peroxidase, plant/fungal/bacterial (InterPro:IPR002016); BEST Arabidopsis thaliana protein match is: ascorbate peroxidase 3 (TAIR:AT4G35000.1); Has 11368 Blast hits to 9243 proteins in 1286 species: Archae - 103; Bacteria - 4136; Metazoa - 9; Fungi - 795; Plants - 3885; Viruses - 0; Other Eukaryotes - 2440 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G35970-MONOMERBioGrid:15033EC:1.11.1.11eggNOG:COG0376
eggNOG:ENOG410IEWSEMBL:AF441714EMBL:AK119023EMBL:AL022373
EMBL:AL031986EMBL:AL161588EMBL:BT006053EMBL:CP002687
EnsemblPlants:AT4G35970EnsemblPlants:AT4G35970.1entrez:829751GeneID:829751
Genevisible:Q7XZP5GO:GO:0005778GO:GO:0006979GO:GO:0016021
GO:GO:0016688GO:GO:0020037GO:GO:0042744GO:GO:0046872
Gramene:AT4G35970.1hmmpanther:PTHR31356hmmpanther:PTHR31356:SF8HOGENOM:HOG000189824
InParanoid:Q7XZP5InterPro:IPR002016InterPro:IPR002207InterPro:IPR010255
InterPro:IPR019793InterPro:IPR019794KEGG:ath:AT4G35970KO:K00434
OMA:VIFTICYPaxDb:Q7XZP5PeroxiBase:1887Pfam:PF00141
Pfam:Q7XZP5Pfscan:PS50873PhylomeDB:Q7XZP5PIR:T04707
PRIDE:Q7XZP5PRINTS:PR00458PRINTS:PR00459PRO:PR:Q7XZP5
PROSITE:PS00435PROSITE:PS00436PROSITE:PS50873ProteinModelPortal:Q7XZP5
Proteomes:UP000006548RefSeq:NP_195321.1scanprosite:PS00435scanprosite:PS00436
SMR:Q7XZP5STRING:3702.AT4G35970.1SUPFAM:SSF48113TAIR:AT4G35970
tair10-symbols:APX5TMHMM:TMhelixUniGene:At.31367UniProt:Q7XZP5
Coordinates (TAIR10) chr4:+:17028651..17030205
Molecular Weight (calculated) 30897.00 Da
IEP (calculated) 9.02
GRAVY (calculated) -0.40
Length 279 amino acids
Sequence (TAIR10)
(BLAST)
001: MAVNVDAEYL KEIEKTRRDL RALISSRNCA PIMLRLAWHD AGTYDAKKKT GGANGSIRFK EELNRPHNKG LEKAVAFCEE VKAKHPRVSY ADLYQLAGVV
101: AVEVTGGPAI PFTPGRKDAD SADDGELPNP NEGASHLRTL FSRMGLLDRD IVALSGGHTL GRAHKERSDF EGPWTQDPLK FDNSYFVELL KGETPGLLQL
201: KTDKALLDDP KFHPFVKLYA KDEDMFFKAY AISHKKLSEL GFNPPRRIPS AVTQQTLGIA VAAAVVIFTI CYEASRRGK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)