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AT1G02950.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 0.498
plasma membrane 0.345
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : glutathione S-transferase F4
Curator
Summary (TAIR10)
Encodes glutathione transferase belonging to the phi class of GSTs. Naming convention according to Wagner et al. (2002).
Computational
Description (TAIR10)
glutathione S-transferase F4 (GSTF4); CONTAINS InterPro DOMAIN/s: Thioredoxin fold (InterPro:IPR012335), Glutathione S-transferase, C-terminal (InterPro:IPR004046), Glutathione S-transferase, C-terminal-like (InterPro:IPR010987), Glutathione S-transferase/chloride channel, C-terminal (InterPro:IPR017933), Glutathione S-transferase, N-terminal (InterPro:IPR004045), Thioredoxin-like fold (InterPro:IPR012336); BEST Arabidopsis thaliana protein match is: glutathione S-transferase (class phi) 5 (TAIR:AT1G02940.1); Has 7141 Blast hits to 7136 proteins in 1104 species: Archae - 0; Bacteria - 3457; Metazoa - 949; Fungi - 470; Plants - 873; Viruses - 0; Other Eukaryotes - 1392 (source: NCBI BLink).
Protein Annotations
EnsemblPlants:AT1G02950EnsemblPlants:AT1G02950.1entrez:838240hmmpanther:PTHR11260
hmmpanther:PTHR11260:SF201Pfam:PF00043Pfam:PF02798Pfscan:PS50404
Pfscan:PS50405tair10-symbols:ATGSTF4tair10-symbols:GST31tair10-symbols:GSTF4
Coordinates (TAIR10) chr1:-:665308..666420
Molecular Weight (calculated) 28532.40 Da
IEP (calculated) 9.02
GRAVY (calculated) -0.51
Length 243 amino acids
Sequence (TAIR10)
(BLAST)
001: MDCLQMVFKL FPNWKREAEV KKLGYKVHGD PFSTNTRRVL AVLHEKRLSY EPITVKLQTG EHKTEPFLSL NPFGQVPVFE DGSVKLYESR AITQYIAYVH
101: SSRGTQLLNL RSHETMATLT MWMEIEAHQF DPPASKLTWE QVIKPIYGLE TDQTIVKENE AILEKVLNIY EKRLEESRFL ACNSFTLVDL HHLPNIQYLL
201: GTPTKKLFEK RSKVRKWVDE ITSREAWKMA CDQEKSWFNK PRN
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)