AT3G20200.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.834 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | ||||||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation, response to stress; LOCATED IN: cellular_component unknown; EXPRESSED IN: male gametophyte, flower, pollen tube; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis; CONTAINS InterPro DOMAIN/s: Rossmann-like alpha/beta/alpha sandwich fold (InterPro:IPR014729), UspA (InterPro:IPR006016), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G16760.1); Has 113274 Blast hits to 111719 proteins in 4667 species: Archae - 115; Bacteria - 13449; Metazoa - 41561; Fungi - 9228; Plants - 32231; Viruses - 306; Other Eukaryotes - 16384 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:+:7047895..7051145 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 86195.80 Da | ||||||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.28 | ||||||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.48 | ||||||||||||||||||||||||||||||||||||||||||||||||
| Length | 780 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MKAQKGSSKK KGTNSGLVAV AVDNNKGSQH ALKWAADHLV SKGQTIILLH VILRSSSDSG EITAEKHKQA ENLFVTFHCY CSRKEIQCLD VTLEDDNIVK 101: SLAEYVSSGV IENLILGAPS RHGFMRKFKI SDTPSNVAKA APDFCTVYVI SKGKISSVRH ASRAAPYRSP LMGQIENHSE IINYEKFRNT MSFRDRAPPR 201: SSTASSIEDY GKSPMARTSN YANSFFDLED SENDISFVCS GRPSTASSGR PSTSTGRSDI SFVSSGRPST STTGSPSFIY DFPDSGLTPR ESTSSGHSMR 301: LGIRFNDTNI QHDFSFVSQD SGRSSCSCSP QNLEEVEAEM RRLKQELKHA IDMYGSACRE ALAAKQEAKE LQRQKIEEEG WVQEGQLSEK STKSIVEKER 401: AHKAAKDASE TAGKIAELET QRRAIEAAGS FSDSSLRYRR YVIGEIEEAT NSFDKANKIG EGGYGPVYKG YLDHTPVAIK ALKADAVQGR SQFQREVEVL 501: SCIRHPHMVL LIGACPEYGV LVYEYMAKGS LADRLYKYGN TPPLSWELRF RIAAEVATGL LFLHQTKPEP IVHRDLKPGN ILIDQNYVSK IGDVGLAKLV 601: PAVAENVTQC HVSSTAGTFC YIDPEYQQTG MLGVKSDVYS FGILLLELLT AKRPTGLAYT VEQAMEQGKF KDMLDPAVPN WPVEEAMSLA KIALKCAQLR 701: RKDRPDLGKE VLPELNKLRA RADTNMEWMM FNLSRGRLTP NHSQVSLPPV DELSVCSDKS YTHSSTVSDT EKNSDQNEED |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)