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AT3G18750.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : with no lysine (K) kinase 6
Curator
Summary (TAIR10)
Encodes a member of the WNK family (9 members in all) of protein kinases, the structural design of which is clearly distinct from those of other known protein kinases, such as receptor-like kinases and mitogen-activated protein kinases. Its transcription is under the control of circadian rhythms.
Computational
Description (TAIR10)
with no lysine (K) kinase 6 (WNK6); CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT1G49160.2); Has 109997 Blast hits to 108787 proteins in 3825 species: Archae - 81; Bacteria - 10561; Metazoa - 41131; Fungi - 10681; Plants - 29357; Viruses - 431; Other Eukaryotes - 17755 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G18750-MONOMERBioCyc:ARA:GQT-923-MONOMERBioCyc:ARA:GQT-924-MONOMEREC:2.7.11.1
eggNOG:ENOG410XQWZeggNOG:KOG0584EMBL:AB026654EMBL:AB084270
EMBL:AK175997EMBL:BT030341EMBL:CP002686EnsemblPlants:AT3G18750
EnsemblPlants:AT3G18750.1EnsemblPlants:AT3G18750.3entrez:821406GeneID:821406
Genevisible:Q8S8Y8GO:GO:0004672GO:GO:0004674GO:GO:0005524
GO:GO:0006468hmmpanther:PTHR13902hmmpanther:PTHR13902:SF62HOGENOM:HOG000239343
InParanoid:Q8S8Y8InterPro:IPR000719InterPro:IPR008271InterPro:IPR011009
KEGG:ath:AT3G18750KO:K08867ncoils:CoilOMA:ENDEQSV
PaxDb:Q8S8Y8Pfam:PF00069Pfam:Q8S8Y8Pfscan:PS50011
PhylomeDB:Q8S8Y8PRIDE:Q8S8Y8PRO:PR:Q8S8Y8PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q8S8Y8Proteomes:UP000006548RefSeq:NP_001030723.1
RefSeq:NP_001189928.1RefSeq:NP_188505.1scanprosite:PS00108SMART:SM00220
SMR:Q8S8Y8STRING:3702.AT3G18750.1SUPFAM:SSF56112TAIR:AT3G18750
tair10-symbols:ATWNK6tair10-symbols:WNK6tair10-symbols:ZIK5UniGene:At.38499
UniProt:Q8S8Y8
Coordinates (TAIR10) chr3:-:6454307..6456830
Molecular Weight (calculated) 64869.20 Da
IEP (calculated) 4.80
GRAVY (calculated) -0.54
Length 567 amino acids
Sequence (TAIR10)
(BLAST)
001: MEGTDDASAL QEPPDPEVLE VDPTFRYIRY KEVIGKGAFK TVYKAFDEVD GIEVAWNQVR IDDVLQSPNC LERLYSEVRL LKSLKHNNII RFYNSWIDDK
101: NKTVNIITEL FTSGSLRHYR KKHRKVNMKA VKNWARQILM GLRYLHGQEP PIIHRDLKCD NIFINGNHGE VKIGDLGLAT VMEQANAKSV IGTPEFMAPE
201: LYDENYNELA DIYSFGMCML EMVTFDYPYC ECKNSAQIYK KVSSGIKPAS LSRVKDPEVK QFIEKCLLPA SERLSAKELL LDPFLQLNGL TMNNPLPLPD
301: IVMPKEGAFG DRCLMSEGPP TTRPSKTLSI DLDEDSNLPI VTFSDNSGSR CIEVRRAKRG NFFVLKGEEN DEQSVSLILR IVDENGRVRN IHFLFYQEGD
401: TASKVSSEMV EQLELTDQNV TFIAELIDIL LVNMIPTWKT DVTVDHLIHS QLNQNSRSHH NEAKPQKQEE TVFHDTCELV SHSCNSDCPR SDEEDKQCVD
501: ATKGEDKSSI QEVEEATEPV SLEEEERLRQ ELEEIEAKYQ EDMKEIATKR EEAIMETKKK LSLMKLK
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)