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AT4G39110.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Malectin/receptor-like protein kinase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Malectin/receptor-like protein kinase family protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: chloroplast; EXPRESSED IN: 10 plant structures; EXPRESSED DURING: L mature pollen stage, M germinated pollen stage, 4 anthesis, C globular stage, petal differentiation and expansion stage; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Malectin/receptor-like protein kinase family protein (TAIR:AT2G21480.1); Has 114802 Blast hits to 113634 proteins in 4321 species: Archae - 99; Bacteria - 12985; Metazoa - 42549; Fungi - 9629; Plants - 32923; Viruses - 364; Other Eukaryotes - 16253 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G39110-MONOMEREC:2.7.11.-eggNOG:COG0515eggNOG:KOG1187
EMBL:AL035679EMBL:AL050351EMBL:AL161594EMBL:CP002687
EnsemblPlants:AT4G39110EnsemblPlants:AT4G39110.1entrez:830066Gene3D:2.60.120.200
GeneID:830066Genevisible:Q9T020GO:GO:0004674GO:GO:0005524
GO:GO:0009507GO:GO:0016021Gramene:AT4G39110.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF106HOGENOM:HOG000238317InParanoid:Q9T020InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788iPTMnet:Q9T020KEGG:ath:AT4G39110
OMA:CDENEEMPaxDb:Q9T020Pfam:PF07714Pfam:PF12819
Pfam:Q9T020Pfscan:PS50011PhylomeDB:Q9T020PIR:T08559
PRIDE:Q9T020PRO:PR:Q9T020PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:Q9T020Proteomes:UP000006548RefSeq:NP_195622.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:Q9T020
STRING:3702.AT4G39110.1SUPFAM:SSF56112TAIR:AT4G39110TMHMM:TMhelix
UniGene:At.70303UniProt:Q9T020
Coordinates (TAIR10) chr4:-:18222483..18225119
Molecular Weight (calculated) 96510.10 Da
IEP (calculated) 6.01
GRAVY (calculated) -0.17
Length 878 amino acids
Sequence (TAIR10)
(BLAST)
001: MEIRKKPNIF TVLVIDFSSK PSMALLLAIL LFLSGPSASA VAAAAVGPAT GFKPADDILI DCGSKSSSKT PDGRVFKSDQ ETIQYIEAKE DIQVSAPPSD
101: KVASPIYLTA RIFREEATYK FHLTRPGWHW VRLHFLAFPN DKFDLQQATF SVLTEKYVLL HNFKISNNNN DSQAAVQKEY LVNMTDAQFA LRFRPMKSSA
201: AFINAIEVVS APDELISDSG TALFPVIGFS GLSDYAYQSV YRVNVGGPLI MPQNDTLGRT WIPDKEFLKD ENLAKDVKTT PSAIKYPPEV TPLIAPQTVY
301: ATAVEMANSL TIDPNFNVSW NFPSNPSFNY LIRLHFCDIV SKSLNDLYFN VYINGKTAIS GLDLSTVAGN LAAPYYKDIV VNATLMGPEL QVQIGPMGED
401: TGTKNAILNG VEVLKMSNSV NSLDGEFGVD GRTTGMGKHG MVATAGFVMM FGAFIGLGAM VYKWKKRPQD WQKRNSFSSW LLPIHAGDST FMTSKGGSQK
501: SNFYNSTLGL GRYFSLSELQ EATKNFEASQ IIGVGGFGNV YIGTLDDGTK VAVKRGNPQS EQGITEFQTE IQMLSKLRHR HLVSLIGYCD ENSEMILVYE
601: FMSNGPFRDH LYGKNLAPLT WKQRLEICIG SARGLHYLHT GTAQGIIHRD VKSTNILLDE ALVAKVADFG LSKDVAFGQN HVSTAVKGSF GYLDPEYFRR
701: QQLTDKSDVY SFGVVLLEAL CARPAINPQL PREQVNLAEW AMQWKRKGLL EKIIDPHLAG TINPESMKKF AEAAEKCLED YGVDRPTMGD VLWNLEYALQ
801: LQEAFTQGKA EETENAKPDV VTPGSVPVSD PSPITPSVTT NEAATVPVPA KVEENSGTAV DEHSGTAMFT QFANLNGR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)