suba logo
AT3G12690.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.965
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : AGC kinase 1.5
Curator
Summary (TAIR10)
Encodes a putative serine/threonine kinase It is expressed specifically in pollen and appears to function redundantly with AGC1.7 to regulate polarized growth of pollen tubes.
Computational
Description (TAIR10)
AGC kinase 1.5 (AGC1.5); FUNCTIONS IN: kinase activity; INVOLVED IN: pollen tube growth, unidimensional cell growth; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 11 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: AGC kinase 1.7 (TAIR:AT1G79250.2); Has 111833 Blast hits to 95913 proteins in 3807 species: Archae - 52; Bacteria - 13852; Metazoa - 43173; Fungi - 12446; Plants - 21680; Viruses - 366; Other Eukaryotes - 20264 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT3G12690-MONOMERBioCyc:ARA:GQT-996-MONOMERBioCyc:ARA:GQT-997-MONOMERBioGrid:5784
EC:2.7.11.1eggNOG:ENOG410XQ0CeggNOG:KOG0610EMBL:AB024033
EMBL:AK229198EMBL:BT011689EMBL:BT020332EMBL:CP002686
EnsemblPlants:AT3G12690EnsemblPlants:AT3G12690.1EnsemblPlants:AT3G12690.2EnsemblPlants:AT3G12690.3
entrez:820450GeneID:820450Genevisible:Q9LTW5GO:GO:0004674
GO:GO:0005524GO:GO:0005737GO:GO:0005886GO:GO:0009860
GO:GO:0016301GO:GO:0035556Gramene:AT3G12690.1Gramene:AT3G12690.2
Gramene:AT3G12690.3hmmpanther:PTHR24351hmmpanther:PTHR24351:SF55HOGENOM:HOG000233027
InParanoid:Q9LTW5IntAct:Q9LTW5InterPro:IPR000719InterPro:IPR008271
InterPro:IPR011009KEGG:ath:AT3G12690OMA:KRAPRHNPaxDb:Q9LTW5
Pfam:PF00069Pfam:Q9LTW5Pfscan:PS50011PhylomeDB:Q9LTW5
PRIDE:Q9LTW5PRO:PR:Q9LTW5PROSITE:PS00108PROSITE:PS50011
ProteinModelPortal:Q9LTW5Proteomes:UP000006548RefSeq:NP_187875.1RefSeq:NP_974295.1
RefSeq:NP_974296.1scanprosite:PS00108SMART:SM00220SMR:Q9LTW5
STRING:3702.AT3G12690.1SUPFAM:SSF56112TAIR:AT3G12690tair10-symbols:AGC1.5
UniGene:At.39562UniProt:Q9LTW5
Coordinates (TAIR10) chr3:-:4030596..4032400
Molecular Weight (calculated) 63771.00 Da
IEP (calculated) 9.33
GRAVY (calculated) -0.50
Length 577 amino acids
Sequence (TAIR10)
(BLAST)
001: MDLASKKNTA NVGSKEIDPI KPKSPRSSLS PFSLKLGDNV PRNPHFDPKK MDPLVKHQPP KSLEPPPSTR GTNSEGDLKH NTYSSDGDSL AMRKNAPKNL
101: HYDPKKIVPL TTSETYSPSA RNHHHHRTKS PDKKRAPRHN GDYAYGDNLV GPSAQPFKPH TGGDVRWDAI NSIASKGPQI GLDNFRLLKR LGYGDIGSVY
201: LADLRGTNAV FAMKVMDKAS LASRNKLLRA QTEREILSLL DHPFLPTLYS YFETDKFYCL VMEFCSGGNL HSLRQKQPSR RFTEEAARFY ASEVLLALEY
301: LHMLGVVYRD LKPENILVRD EGHIMLSDFD LSLRCTFNPT LVKSSSVCSG GGAILNEEFA VNGCMHPSAF LPRLLPSKKT RKAKSDSGLG GLSMPELMAE
401: PTDVRSMSFV GTHEYLAPEI IRGEGHGSAV DWWTFGIFLY ELLHGTTPFK GQGNRATLHN VVGQPLKFPD TPHVSSAARD LIRGLLVKDP HRRIAYTRGA
501: TEIKQHPFFE GVNWALVRSA APPHIPDPVD LGPYAAARGK TKSHGGGDHC NSMKPEPLVA CAAGPTDDTA YIDFEYF
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)