AT1G78940.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 0.876 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase protein with adenine nucleotide alpha hydrolases-like domain | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase protein with adenine nucleotide alpha hydrolases-like domain; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Serine/threonine-protein kinase, active site (InterPro:IPR008271), Protein kinase-like domain (InterPro:IPR011009); BEST Arabidopsis thaliana protein match is: Protein kinase protein with adenine nucleotide alpha hydrolases-like domain (TAIR:AT1G16760.1); Has 112231 Blast hits to 110580 proteins in 4381 species: Archae - 118; Bacteria - 13767; Metazoa - 40808; Fungi - 9212; Plants - 31998; Viruses - 225; Other Eukaryotes - 16103 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:-:29681056..29683678 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 75936.70 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 6.05 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.51 | ||||||||||||||||||||||||||||||||||||||||
| Length | 680 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEKIAKDLFV SFHCYCSRKE INCRDILLED ADKVRAITEY VSSSAIENLV VGSASRNGFM RRFKTDLPTT VSKSAPDFCN VYVISKGKIA SVRNASRPAP 101: YQNSMQQCEI DNHHPHTPDK APKYHDHPNS AGSTPSRPRK SVEADRSPLV KRKPYGDFYD SDSDLSFISP SSHRDSDISF ISSGRPSVER SSFSLDFPES 201: ARTSRMSTSS EQSIGSNRLG IKFSDPDFLN ESSTFSEESG RTSSYSSQSL DDVEAEMKRL RLELKQTMDM YSTACKEALS ARQQATELQK LRTEEERRLE 301: EAKSSEEAAM SIVEKERAKA KAALEAAEAA KRLAEVESKR RLTAEMKTMK ESDSFSRGFV RYRKYTVDEI EEATSNFAES QKVGEGGYGP VFRGFLDHTS 401: VAVKVLRPDA AQGRSQFQKE VEVLSCIRHP NMVLLLGACP EFGILVYEYM AKGSLEDRLF MRGNTPPITW QLRFRIAAEI ATGLLFLHQT KPEPIVHRDL 501: KPGNVLLDYN YVSKISDVGL ARLVPAVAEN VTQYRVTSAA GTFCYIDPEY QQTGMLGVKS DVYSLGIMLL QILTAKQPMG LAYYVEQAIE EGTLKDMLDP 601: AVPDWPIEEA LSLAKLSLQC AELRRKDRPD LGKEILPELN RLREIGEESL ESVFYAGNQG KSPNTSQVSI PESPAAESQS |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)