AT3G18240.1
|
Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
|
||||||||||||||||||||||||||||||||||||||||
| Experimental Localisations and PPI |
|
||||||||||||||||||||||||||||||||||||||||
|
SUBAcon links
AGI-AGI relationships |
|
||||||||||||||||||||||||||||||||||||||||
| Description (TAIR10) | protein_coding : Ribosomal protein S24/S35, mitochondrial | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
|||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
Ribosomal protein S24/S35, mitochondrial; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cytosol, nucleus; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Ribosomal protein S24/S35, mitochondrial (InterPro:IPR019349); BEST Arabidopsis thaliana protein match is: Ribosomal protein S24/S35, mitochondrial (TAIR:AT4G21460.1); Has 302 Blast hits to 286 proteins in 105 species: Archae - 0; Bacteria - 67; Metazoa - 57; Fungi - 33; Plants - 60; Viruses - 2; Other Eukaryotes - 83 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
|
||||||||||||||||||||||||||||||||||||||||
| Coordinates (TAIR10) | chr3:+:6255810..6257695 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 48055.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 4.71 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.83 | ||||||||||||||||||||||||||||||||||||||||
| Length | 419 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MRGALLRNAS LCARRIILSP RITHQISPNV PFLAPIAAPA APKFRFFSSE SGENSTTAPE SSPTDSPEKK DLVVEDVSNK ELKSRIEKYF NEGNEDALPG 101: VIEALLQRRL VDKHAETDDE LLEKIESLPF KDDVKDEDFE SDFEEAHSTD EELEDLYNSP EYVAEKMRKN EFFNMDDKKW DHMIREGIQH GCLTDTKECE 201: EILEDMLKWD QLLPDDLKKK VEAKFNELGD MCERGEIEAE AAYELFKEFE DEMVIQYGDQ MEAEGPPQFG ETDASDRNTD LDDPPGKGPI LRWQSRIVFA 301: PGGDAWHPKN RKVKMSVTVK ELGLSKHQAK RLRELVGKRY HSGKDELTIT SERFEHREEN RKDCLRTLYG LIEEAGKANK IAEDIRTSYV KQRLRANPAF 401: MQKLQAKIIR SKESDAINA |
||||||||||||||||||||||||||||||||||||||||
| See Also |
|
||||||||||||||||||||||||||||||||||||||||
Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)