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AT2G18330.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : AAA-type ATPase family protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
AAA-type ATPase family protein; FUNCTIONS IN: nucleoside-triphosphatase activity, ATPase activity, nucleotide binding, ATP binding; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: ATPase, AAA-type, core (InterPro:IPR003959), ATPase, AAA+ type, core (InterPro:IPR003593), ATPase, AAA-type, conserved site (InterPro:IPR003960), Protein of unknown function DUF3523 (InterPro:IPR021911); BEST Arabidopsis thaliana protein match is: AAA-type ATPase family protein (TAIR:AT4G36580.1); Has 47815 Blast hits to 38452 proteins in 3171 species: Archae - 1435; Bacteria - 14558; Metazoa - 11715; Fungi - 4870; Plants - 3045; Viruses - 138; Other Eukaryotes - 12054 (source: NCBI BLink).
Protein Annotations
eggNOG:COG1223eggNOG:KOG0742EMBL:AC006439EMBL:AY054494
EMBL:AY093265EMBL:CP002685EnsemblPlants:AT2G18330EnsemblPlants:AT2G18330.1
entrez:816348Gene3D:3.40.50.300GeneID:816348GO:GO:0005524
GO:GO:0005739Gramene:AT2G18330.1hmmpanther:PTHR23075hmmpanther:PTHR23075:SF3
HOGENOM:HOG000231291InterPro:IPR003593InterPro:IPR003959InterPro:IPR003960
InterPro:IPR021911InterPro:IPR027417KEGG:ath:AT2G18330KO:K17681
ncoils:CoilOMA:YTTREGSPfam:PF00004Pfam:PF12037
PhylomeDB:Q9ZPW5PIR:A84563PROSITE:PS00674Proteomes:UP000006548
RefSeq:NP_565435.1scanprosite:PS00674SMART:SM00382SMR:Q9ZPW5
STRING:3702.AT2G18330.1SUPFAM:SSF52540TAIR:AT2G18330UniGene:At.13881
UniProt:Q9ZPW5
Coordinates (TAIR10) chr2:+:7965829..7968915
Molecular Weight (calculated) 71198.40 Da
IEP (calculated) 9.48
GRAVY (calculated) -0.68
Length 636 amino acids
Sequence (TAIR10)
(BLAST)
001: MAASRLCSAA AIAAAFTSMS MSQNRAYADS RFRFPFFSSS PPAEESPTDH KSSSNSKSET KPDSDEPKGS GFDPESLERG AKALREINSS PHSKQVFDLM
101: RKQEKTRLAE LAAEKEHNEA IQASKDIERQ RKLAEDQRNL VQQQAQAKAQ NLRYEDELAR KRMQTDNEAQ RRHNAELVSM QEASSIRKEK ARIATEEQIQ
201: AQQRETEKER AELERETIRV KAMAEAEGRA HEAKLTEEQN RRMLLDKING EREKWLAAIN TTFSHIEGGV RTLLTDRSKL IMTVGGVTAL AAGVYTTREG
301: ARVTWGYINR ILGQPSLIRE SSMGRFPWAG SVSQFKNKLS TAAGAAASAE GEKPLENVIL HRSLKTRIER LARATANTKS HKAPFRNMMF YGPPGTGKTM
401: VAREIARKSG LDYAMMTGGD VAPLGAQAVT KIHEIFDWAK KSNKGLLLFI DEADAFLCER NSTYMSEAQR SALNALLFRT GDQSRDIVLV LATNRPGDLD
501: SAVTDRIDEV IEFPLPGEEE RFKLLKLYLN KYLMGDDKKG EKDSNLKWSN LFKKKKSQKI TIEGDLTDQV IKEAAKKTEG FSGREIAKLV AGVQAAVYGR
601: QDCVLDSQLF EEIVDYKIEE HHQRIRLATE GGQSFP
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)