AT3G10870.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:nucleus 0.985 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : methyl esterase 17 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
Encodes a methyl IAA esterase. Methyl IAA is believed to be an inactive form of auxin that needs to be demethylated to exert a biological effect. MES17 does not act on methyl JA, MeSA, MeGA4, or MEGA9 in vitro. This gene is expressed in several tissues of seedlings and adult plants, with a higher relative level of expression in the seedling shoot apex and the adult stem. | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Computational Description (TAIR10) |
methyl esterase 17 (MES17); CONTAINS InterPro DOMAIN/s: Alpha/beta hydrolase fold-1 (InterPro:IPR000073); BEST Arabidopsis thaliana protein match is: methyl esterase 18 (TAIR:AT5G58310.1); Has 1383 Blast hits to 1383 proteins in 290 species: Archae - 0; Bacteria - 591; Metazoa - 1; Fungi - 15; Plants - 599; Viruses - 2; Other Eukaryotes - 175 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr3:-:3401228..3402612 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 30869.20 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 4.84 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.19 | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 276 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAEENQEETL ELKPSRKPPH FVLIHGMSLG SWCWYKIKCL MEVSGFTVTC IDLKSSGIDS SSVDSLTTFD QYNQPLIDFL SSFPEQEQVI LVGHSAGGLS 101: LTSAIQRFPK KICLAVFIGA SMLKNGLQTD EDMKDGVPDL SEHGDVYELG FGLGPENPPT SAIIKPEYRR KLLYHMSPQQ ECSLAALMMR PAPILALTTA 201: KLEEEEKEKG QEEQVPRVYI KTLLDRVMKP EQQDAMIRRW PPSQVYELES DHSPFFSNPF VLFGLLIKAA VSVGSI |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)