AT2G04032.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:extracellular 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : zinc transporter 7 precursor | ||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
zinc transporter 7 precursor (ZIP7); FUNCTIONS IN: cation transmembrane transporter activity, zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, zinc ion transport, metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1848 Blast hits to 1741 proteins in 306 species: Archae - 0; Bacteria - 134; Metazoa - 385; Fungi - 602; Plants - 510; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:+:1289944..1291251 | ||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 39380.40 Da | ||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.24 | ||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | 0.40 | ||||||||||||||||||||||||||||||||||||||||||||
Length | 365 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MAYSKACYKL TTITILLLSF TLPSLAGNAE NADVSECKAE SGDLSCHNNK EAQKLKIIAI PSILVASMIG VSLPLFSRSI PALGPDREMS VIVKTLASGV 101: ILATGFMHVL PDSFDDLTSK CLPEDPWQKF PFATFITMIS ALLVLMIESF AMCAYARRTS KREGEVVPLE NGSNSVDTQN DIQTLENGSS YVEKQEKVNE 201: DKTSELLRNK VIAQILELGI VVHSVVIGLA MGASDNKCTV QSLIAALCFH QLFEGMGLGG SILQAQFKSK TNWTMVFFFS VTTPFGIVLG MAIQKIYDET 301: SPTALIVVGV LNACSAGLLI YMALVNLLAH EFFGPKIQGN IKLHVLGYVA TFTGAAGMSL MAKWA |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)