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AT2G04032.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
extracellular 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
  • PMID:28865150 (2017): extracellular region plant-type cell wall
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : zinc transporter 7 precursor
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
zinc transporter 7 precursor (ZIP7); FUNCTIONS IN: cation transmembrane transporter activity, zinc ion transmembrane transporter activity, metal ion transmembrane transporter activity; INVOLVED IN: cation transport, zinc ion transport, metal ion transport, transmembrane transport; LOCATED IN: endomembrane system, integral to membrane, membrane; EXPRESSED IN: 12 plant structures; EXPRESSED DURING: 8 growth stages; CONTAINS InterPro DOMAIN/s: Zinc/iron permease, fungal/plant (InterPro:IPR004698), Zinc/iron permease (InterPro:IPR003689); BEST Arabidopsis thaliana protein match is: iron-regulated transporter 1 (TAIR:AT4G19690.2); Has 1848 Blast hits to 1741 proteins in 306 species: Archae - 0; Bacteria - 134; Metazoa - 385; Fungi - 602; Plants - 510; Viruses - 0; Other Eukaryotes - 217 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG4111GP2eggNOG:KOG1558EMBL:AC007167EMBL:AC007178
EMBL:AF369911EMBL:BT015108EMBL:CP002685EnsemblPlants:AT2G04032
EnsemblPlants:AT2G04032.1entrez:814931GeneID:814931Genevisible:Q8W246
GO:GO:0005385GO:GO:0005886GO:GO:0016021GO:GO:0071577
Gramene:AT2G04032.1hmmpanther:PTHR11040hmmpanther:PTHR11040:SF41HOGENOM:HOG000157076
InParanoid:Q8W246InterPro:IPR003689InterPro:IPR004698KEGG:ath:AT2G04032
KO:K14709OMA:NADVSECPaxDb:Q8W246Pfam:PF02535
Pfam:Q8W246PhylomeDB:Q8W246PRIDE:Q8W246PRO:PR:Q8W246
Proteomes:UP000006548RefSeq:NP_178488.1STRING:3702.AT2G04032.1TAIR:AT2G04032
tair10-symbols:ZIP7TIGRfam:TIGR00820TIGRFAMs:TIGR00820TMHMM:TMhelix
UniGene:At.50813UniProt:Q8W246
Coordinates (TAIR10) chr2:+:1289944..1291251
Molecular Weight (calculated) 39380.40 Da
IEP (calculated) 6.24
GRAVY (calculated) 0.40
Length 365 amino acids
Sequence (TAIR10)
(BLAST)
001: MAYSKACYKL TTITILLLSF TLPSLAGNAE NADVSECKAE SGDLSCHNNK EAQKLKIIAI PSILVASMIG VSLPLFSRSI PALGPDREMS VIVKTLASGV
101: ILATGFMHVL PDSFDDLTSK CLPEDPWQKF PFATFITMIS ALLVLMIESF AMCAYARRTS KREGEVVPLE NGSNSVDTQN DIQTLENGSS YVEKQEKVNE
201: DKTSELLRNK VIAQILELGI VVHSVVIGLA MGASDNKCTV QSLIAALCFH QLFEGMGLGG SILQAQFKSK TNWTMVFFFS VTTPFGIVLG MAIQKIYDET
301: SPTALIVVGV LNACSAGLLI YMALVNLLAH EFFGPKIQGN IKLHVLGYVA TFTGAAGMSL MAKWA
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)