AT1G74810.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : HCO3- transporter family | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
BOR5; FUNCTIONS IN: anion exchanger activity; INVOLVED IN: anion transport; LOCATED IN: integral to membrane, membrane; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 7 growth stages; CONTAINS InterPro DOMAIN/s: Bicarbonate transporter, eukaryotic (InterPro:IPR003020), Bicarbonate transporter, C-terminal (InterPro:IPR011531); BEST Arabidopsis thaliana protein match is: HCO3- transporter family (TAIR:AT1G15460.1); Has 2579 Blast hits to 1402 proteins in 194 species: Archae - 0; Bacteria - 4; Metazoa - 1942; Fungi - 299; Plants - 229; Viruses - 2; Other Eukaryotes - 103 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:28108474..28111534 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 76739.90 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.32 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | 0.14 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 683 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MEEERVEGSK RPFQGIIRDV KGRALCYKQD WIAGLRSGFG ILAPTTYVFF ASALPVIAFG EQLSHDTERS LSTVETLAST ALCGVIHSLL GGQPLLILGV 101: AEPTVLMYKY LYDFAKGRPE LGKQLYLAWV AWVCVWTALL LFLMAIFNMA YIINRFTRIA GELFGMLIAV LFLQQTIKGM VSEFRIPKGE DSKLEKYQFE 201: WLYTNGLLGL IFTVGLVYTA LKSRKARSWP YGTGCCRSFV ADYGVPLMVV VWTALSFSTP SKLPSGVPRR LVSPLPWDSV SLTHWTVIKD MGKVSPGYIF 301: AAFIPALMIA GLYFFDHSVV SQLAQQKEFN LKNPSAYHYD ILLLGFMVLI CGMLGLPPSN GVLPQSPMHT KSLAVFKRQL MRRKMVMTAK ESIRQKATSS 401: QVYEDMEQVF IEMDKSPLAE THTTLINELQ DLKEAVMKKS DDDGDTGEES GFDPEKHVDA YLPVRVNEQR VSNLLQSLLV IGAVFALPVI KLIPTSLLWG 501: YFAYMAIDSL PDNQFFERTV LLFVPPTRRF KVLEGAHASF VEKVPHKSIA AFTLFQILYF GLCYGVTWIP VAGIMFPVLF FLLVAIRQYL LPKLFKPAYL 601: RELDAAEYEE IPGTPRNPLE LSFRSNNSAR GVQECDAEIL DELTTSRGEL KVRTLGHNED KGHQIYPKEI VEVGDGDMSS SRE |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)