AT2G33850.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:extracellular 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : | ||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: endomembrane system; EXPRESSED IN: 17 plant structures; EXPRESSED DURING: 9 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G28400.1); Has 3053 Blast hits to 2119 proteins in 133 species: Archae - 6; Bacteria - 52; Metazoa - 135; Fungi - 96; Plants - 73; Viruses - 2; Other Eukaryotes - 2689 (source: NCBI BLink). | ||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:14321221..14322024 | ||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 31352.80 Da | ||||||||||||||||||||||||||||
| IEP (calculated) | 4.36 | ||||||||||||||||||||||||||||
| GRAVY (calculated) | -1.54 | ||||||||||||||||||||||||||||
| Length | 267 amino acids | ||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MAFSTSSCLF FFLLTLVLFS TQISARNSYS FGKFQREDPK EQNPNNLVPI ETNEKKEPDD QNPAFIPQSE NGYGLYGHET TDNNNEELNN NKYEDNVNYD 101: DSFSTPSLSE TAQTQESYKN YKESYPKTTE IYDNNKDTSY YENSNAYGTD KRDNDINDPY KGYSNKDTSY YENPNTYGTE KREKEPAYRG YNNNVERQGM 201: SDTRYMANGK YYYDLDDDRN HGRFYQNHYY NYKPTGYNEK KSNFKNPYDS NQQSEMLGEE QGDQITP |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)