AT2G25220.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:plasma membrane 0.957 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: protein serine/threonine kinase activity, protein kinase activity, kinase activity, ATP binding; INVOLVED IN: protein amino acid phosphorylation; EXPRESSED IN: 8 plant structures; EXPRESSED DURING: LP.06 six leaves visible, 4 anthesis, petal differentiation and expansion stage, LP.08 eight leaves visible; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase domain (InterPro:IPR002290), Tyrosine-protein kinase, catalytic domain (InterPro:IPR020635), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: Protein kinase superfamily protein (TAIR:AT4G32000.2); Has 125867 Blast hits to 124455 proteins in 4629 species: Archae - 105; Bacteria - 14459; Metazoa - 46929; Fungi - 10399; Plants - 34675; Viruses - 537; Other Eukaryotes - 18763 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr2:-:10742918..10745540 | ||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 45742.50 Da | ||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 8.74 | ||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.05 | ||||||||||||||||||||||||||||||||||||||||
| Length | 414 amino acids | ||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MIFITVSASS ASNPSLAPVY SSMATFSPRI QMGSGEEDRF DAHKKLLIGL IISFSSLGLI ILFCFGFWVY RKNQSPKSIN NSDSESGNSF SLLMRRLGSI 101: KTQRRTSIQK GYVQFFDIKT LEKATGGFKE SSVIGQGGFG CVYKGCLDNN VKAAVKKIEN VSQEAKREFQ NEVDLLSKIH HSNVISLLGS ASEINSSFIV 201: YELMEKGSLD EQLHGPSRGS ALTWHMRMKI ALDTARGLEY LHEHCRPPVI HRDLKSSNIL LDSSFNAKIS DFGLAVSLDE HGKNNIKLSG TLGYVAPEYL 301: LDGKLTDKSD VYAFGVVLLE LLLGRRPVEK LTPAQCQSLV TWAMPQLTDR SKLPNIVDAV IKDTMDLKHL YQVAAMAVLC VQPEPSYRPL ITDVLHSLVP 401: LVPVELGGTL RLTR |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)