AT3G05330.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:nucleus 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : cyclin family | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
Encodes a protein with moderate sequence similarity to the maize microtubule-binding protein TANGLED1. A single base-pair deletion (-A) at position Chr3:1519176 in Columbia relative to the Landsberg erecta and Achkarren-2 ecotype (see ESTs DR378436 and CB26450) introduces a frame-shift and premature termination codon. The protein encoded from the Columbia gene is truncated by 29 amino acids relative to the Landsberg erecta and Achkarren-2 encoded proteins. Involved in the identification of the division plane during mitosis amd cytokinesis | ||||||||||||||||||||||||||||||||||||||||||||
| Computational Description (TAIR10) |
TANGLED (ATN); FUNCTIONS IN: molecular_function unknown; INVOLVED IN: cytokinesis, initiation of separation, phragmoplast assembly; LOCATED IN: microtubule associated complex, preprophase band; EXPRESSED IN: cultured cell; Has 705 Blast hits to 473 proteins in 108 species: Archae - 0; Bacteria - 3; Metazoa - 504; Fungi - 31; Plants - 75; Viruses - 28; Other Eukaryotes - 64 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr3:-:1519162..1521159 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 49527.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 12.23 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.82 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 444 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MVARTPQKQR KVAMVVPPLN SDLLKETINK VDKCMERLQE LQYTIAGGTK VVSGVNLSPR STRIYLKTSL RCKQETLRIK NATNKKSPVG KFPASSPGDW 101: RKMSLPAMLL GETVNEILQA SQVTRDIVDA IAPKKSRKSR RLTMSQEDDG PKTPETQQKS REQNPETVSS NIKARRKKEK QNRRSESDSP PSLQRARSRI 201: AFRTISPQVK GNNGENSFRH LANRVSPKHK PWVKKAVLFP NPLFISGTAT QQAKFSRTMS PVIARNEISS IKNNKETPYK FLIKSPPTSA SKFQVKIRSP 301: PKVLVSPTRN GSNSVRKSPR GSRSPTRTVN LGKKSASISP IRNTGKRSPK LSTAAKLRRS FTPTRNGSNL ARKSSISPKR VTLQAFLSPT RNGNFCKKSP 401: KASISPTRVC NKSQKLSTAA KFRRSFSPSR LAMRFVSPMK SRKV |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)