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AT2G45030.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
mitochondrion 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Translation elongation factor EFG/EF2 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, GTP binding, translation elongation factor activity, GTPase activity; INVOLVED IN: response to cadmium ion; LOCATED IN: mitochondrion; EXPRESSED IN: cultured cell; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Elongation factor G/III/V (InterPro:IPR009022), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT1G45332.1); Has 86156 Blast hits to 73724 proteins in 9924 species: Archae - 905; Bacteria - 48991; Metazoa - 8060; Fungi - 6843; Plants - 1619; Viruses - 3; Other Eukaryotes - 19735 (source: NCBI BLink).
Protein Annotations
eggNOG:COG0480eggNOG:KOG0465EMBL:AC007659EMBL:CP002685
EnsemblPlants:AT2G45030EnsemblPlants:AT2G45030.1entrez:819110Gene3D:3.30.230.10
Gene3D:3.30.70.240Gene3D:3.40.50.300GeneID:819110Genevisible:F4IW10
GO:GO:0003746GO:GO:0003924GO:GO:0005525GO:GO:0005739
GO:GO:0046686Gramene:AT2G45030.1HAMAP:MF_00054_BInParanoid:F4IW10
InterPro:IPR000640InterPro:IPR000795InterPro:IPR004161InterPro:IPR004540
InterPro:IPR005225InterPro:IPR005517InterPro:IPR009000InterPro:IPR009022
InterPro:IPR014721InterPro:IPR020568InterPro:IPR027417InterPro:IPR031157
iPTMnet:F4IW10KEGG:ath:AT2G45030KO:K02355OMA:AREEMID
PaxDb:F4IW10Pfam:F4IW10Pfam:PF00009Pfam:PF00679
Pfam:PF03144Pfam:PF03764Pfam:PF14492Pfscan:PS51722
PRIDE:F4IW10PRINTS:PR00315PRO:PR:F4IW10PROSITE:PS00301
PROSITE:PS51722ProteinModelPortal:F4IW10Proteomes:UP000006548RefSeq:NP_182029.1
scanprosite:PS00301SMART:SM00838SMART:SM00889SMR:F4IW10
STRING:3702.AT2G45030.1SUPFAM:SSF50447SUPFAM:SSF52540SUPFAM:SSF54211
SUPFAM:SSF54980TAIR:AT2G45030TIGRfam:TIGR00231TIGRfam:TIGR00484
TIGRFAMs:TIGR00231TIGRFAMs:TIGR00484UniGene:At.48592UniPathway:UPA00345
UniProt:F4IW10
Coordinates (TAIR10) chr2:+:18572411..18576756
Molecular Weight (calculated) 83116.30 Da
IEP (calculated) 6.29
GRAVY (calculated) -0.26
Length 754 amino acids
Sequence (TAIR10)
(BLAST)
001: MARFPTSPAP NLLLRLFSSN KRASSPTAAL LTGDFHLIRH FSAGTAARAV KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVGDKRR ELIETVSEVD DVLAEKFLND EPVSAAELEE
301: AIRRATIAQK FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)