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AT1G45332.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

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SUBAcon:
mitochondrion 1.000
ASURE: mitochondrion
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
FP Images

Arabidopsis cell culture (mitochondrial marker)

At1g45332-GFP
(full-length)
mitochondrial marker-RFPoverlay

Images by Sandra Tanz

onion epidermal cell layer (mitochondrial marker)

At1g45332-GFP
(full-length)
mitochondrial marker-RFPoverlay

Images by Sandra Tanz
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Translation elongation factor EFG/EF2 protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Translation elongation factor EFG/EF2 protein; FUNCTIONS IN: translation factor activity, nucleic acid binding, translation elongation factor activity, ATP binding; INVOLVED IN: translational elongation; LOCATED IN: mitochondrion; CONTAINS InterPro DOMAIN/s: Protein synthesis factor, GTP-binding (InterPro:IPR000795), Translation elongation factor EFG/EF2, domain IV (InterPro:IPR005517), Small GTP-binding protein (InterPro:IPR005225), Translation elongation factor EFTu/EF1A, domain 2 (InterPro:IPR004161), Translation elongation factor EFG/EF2, C-terminal (InterPro:IPR000640), Ribosomal protein S5 domain 2-type fold (InterPro:IPR020568), Translation elongation factor EFG/EF2 (InterPro:IPR004540), Ribosomal protein S5 domain 2-type fold, subgroup (InterPro:IPR014721), Elongation factor G/III/V (InterPro:IPR009022), Translation elongation/initiation factor/Ribosomal, beta-barrel (InterPro:IPR009000); BEST Arabidopsis thaliana protein match is: Translation elongation factor EFG/EF2 protein (TAIR:AT2G45030.1); Has 85600 Blast hits to 73226 proteins in 9903 species: Archae - 926; Bacteria - 48433; Metazoa - 8034; Fungi - 6838; Plants - 1636; Viruses - 3; Other Eukaryotes - 19730 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:GQT-144-MONOMERBioCyc:ARA:GQT-2747-MONOMERBioGrid:26322eggNOG:COG0480
eggNOG:KOG0465EMBL:AC083835EMBL:AK227329EMBL:CP002684
EnsemblPlants:AT1G45332EnsemblPlants:AT1G45332.1entrez:841097Gene3D:3.30.230.10
Gene3D:3.30.70.240Gene3D:3.40.50.300GeneID:841097Genevisible:Q9C641
GO:GO:0003746GO:GO:0003924GO:GO:0005524GO:GO:0005525
GO:GO:0005739Gramene:AT1G45332.1HAMAP:MF_00054_Bhmmpanther:PTHR23115
hmmpanther:PTHR23115:SF162HOGENOM:HOG000231585InParanoid:Q9C641InterPro:IPR000640
InterPro:IPR000795InterPro:IPR004161InterPro:IPR004540InterPro:IPR005225
InterPro:IPR005517InterPro:IPR009000InterPro:IPR009022InterPro:IPR014721
InterPro:IPR020568InterPro:IPR027417InterPro:IPR031157iPTMnet:Q9C641
KEGG:ath:AT1G45332KO:K02355OMA:HANIRINPaxDb:Q9C641
Pfam:PF00009Pfam:PF00679Pfam:PF03144Pfam:PF03764
Pfam:PF14492Pfam:Q9C641Pfscan:PS51722PhylomeDB:Q9C641
PIR:D96510PRIDE:Q9C641PRINTS:PR00315PRO:PR:Q9C641
PROSITE:PS00301PROSITE:PS51722ProteinModelPortal:Q9C641Proteomes:UP000006548
RefSeq:NP_175135.1scanprosite:PS00301SMART:SM00838SMART:SM00889
SMR:Q9C641STRING:3702.AT1G45332.1SUPFAM:SSF50447SUPFAM:SSF52540
SUPFAM:SSF54211SUPFAM:SSF54980TAIR:AT1G45332TIGRfam:TIGR00231
TIGRfam:TIGR00484TIGRFAMs:TIGR00231TIGRFAMs:TIGR00484UniGene:At.20511
UniPathway:UPA00345UniProt:Q9C641
Coordinates (TAIR10) chr1:-:17172507..17176683
Molecular Weight (calculated) 83183.30 Da
IEP (calculated) 6.23
GRAVY (calculated) -0.27
Length 754 amino acids
Sequence (TAIR10)
(BLAST)
001: MARFPTSPAP NRLLRLFSSN KRSSSPTAAL LTGDFQLIRH FSAGTAARVA KDEKEPWWKE SMDKLRNIGI SAHIDSGKTT LTERVLFYTG RIHEIHEVRG
101: RDGVGAKMDS MDLEREKGIT IQSAATYCTW KDYKVNIIDT PGHVDFTIEV ERALRVLDGA ILVLCSVGGV QSQSITVDRQ MRRYEVPRVA FINKLDRMGA
201: DPWKVLNQAR AKLRHHSAAV QVPIGLEENF QGLIDLIHVK AYFFHGSSGE NVVAGDIPAD MEGLVAEKRR ELIETVSEVD DVLAEKFLND EPVSASELEE
301: AIRRATIAQT FVPVFMGSAF KNKGVQPLLD GVVSFLPSPN EVNNYALDQN NNEERVTLTG SPDGPLVALA FKLEEGRFGQ LTYLRVYEGV IKKGDFIINV
401: NTGKRIKVPR LVRMHSNDME DIQEAHAGQI VAVFGIECAS GDTFTDGSVK YTMTSMNVPE PVMSLAVQPV SKDSGGQFSK ALNRFQKEDP TFRVGLDPES
501: GQTIISGMGE LHLDIYVERM RREYKVDATV GKPRVNFRET ITQRAEFDYL HKKQSGGAGQ YGRVTGYVEP LPPGSKEKFE FENMIVGQAI PSGFIPAIEK
601: GFKEAANSGS LIGHPVENLR IVLTDGASHA VDSSELAFKM AAIYAFRLCY TAARPVILEP VMLVELKVPT EFQGTVAGDI NKRKGIIVGN DQEGDDSVIT
701: ANVPLNNMFG YSTSLRSMTQ GKGEFTMEYK EHSAVSNEVQ AQLVNAYSAS KATE
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)