AT1G09300.1
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Subcellular Consensus
(Prediction and Experimental) min:  :max.
SUBAcon:mitochondrion 1.000 What is SUBAcon? |
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| Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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| Description (TAIR10) | protein_coding : Metallopeptidase M24 family protein | ||||||||||||||||||||||||||||||||||||||||||||
| Curator Summary (TAIR10) |
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| Computational Description (TAIR10) |
Metallopeptidase M24 family protein; FUNCTIONS IN: metallopeptidase activity, manganese ion binding, metalloexopeptidase activity, aminopeptidase activity; INVOLVED IN: proteolysis, cellular process; LOCATED IN: mitochondrion; EXPRESSED IN: 18 plant structures; EXPRESSED DURING: 10 growth stages; CONTAINS InterPro DOMAIN/s: Peptidase M24B, X-Pro dipeptidase/aminopeptidase P N-terminal (InterPro:IPR007865), Peptidase M24, structural domain (InterPro:IPR000994), Peptidase M24, methionine aminopeptidase (InterPro:IPR001714); BEST Arabidopsis thaliana protein match is: Metallopeptidase M24 family protein (TAIR:AT4G29490.1); Has 16476 Blast hits to 16448 proteins in 2755 species: Archae - 330; Bacteria - 11247; Metazoa - 589; Fungi - 576; Plants - 221; Viruses - 0; Other Eukaryotes - 3513 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||
| Protein Annotations |
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| Coordinates (TAIR10) | chr1:+:3003981..3008131 | ||||||||||||||||||||||||||||||||||||||||||||
| Molecular Weight (calculated) | 54985.20 Da | ||||||||||||||||||||||||||||||||||||||||||||
| IEP (calculated) | 7.35 | ||||||||||||||||||||||||||||||||||||||||||||
| GRAVY (calculated) | -0.31 | ||||||||||||||||||||||||||||||||||||||||||||
| Length | 493 amino acids | ||||||||||||||||||||||||||||||||||||||||||||
| Sequence (TAIR10) (BLAST) |
001: MQFLARNLVR RVSRTQVVSR NAYSTQTVRD IGQPTPASHP HLMAEGEVTP GIRIEEYIGR RKKLVELLPE NSLAIISSAP VKMMTDVVPY TFRQDADYLY 101: LTGCQQPGGV AVLSDERGLC MFMPESTPKD IAWEGEVAGV DAASEVFKAD QAYPISKLPE ILSDMIRHSS KVFHNVQSAS QRYTNLDDFQ NSASLGKVKT 201: LSSLTHELRL IKSPAELKLM RESASIACQG LLKTMLHSKG FPDEGILSAQ VEYECRVRGA QRMAFNPVVG GGSNASVIHY SRNDQRIKDG DLVLMDMGCE 301: LHGYVSDLTR TWPPCGKFSS VQEELYDLIL QTNKECIKQC KPGTTIRQLN TYSTELLCDG LMKMGILKSR RLYHQLNPTS IGHYLGMDVH DSSAVGYDRP 401: LQPGFVITIE PGVYIPSSFD CPERFQGIGI RIEDDVLITE TGYEVLTGSM PKEIKHIETL LNNHCHDNSA RTSPVSLCKV KGLHTNRNPR RLF |
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| See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)