suba logo
AT1G29030.1
Subcellular Consensus
(Prediction and Experimental)
min: heatmap :max

.
SUBAcon:
nucleus 0.508
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : Apoptosis inhibitory protein 5 (API5)
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Apoptosis inhibitory protein 5 (API5); FUNCTIONS IN: binding; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; CONTAINS InterPro DOMAIN/s: Apoptosis inhibitory 5 (InterPro:IPR008383), Armadillo-type fold (InterPro:IPR016024); BEST Arabidopsis thaliana protein match is: Apoptosis inhibitory protein 5 (API5) (TAIR:AT2G34040.1); Has 834 Blast hits to 647 proteins in 164 species: Archae - 2; Bacteria - 50; Metazoa - 244; Fungi - 88; Plants - 132; Viruses - 7; Other Eukaryotes - 311 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410XSH0eggNOG:KOG2213EMBL:AK118244EMBL:BT005592
EMBL:CP002684EnsemblPlants:AT1G29030EnsemblPlants:AT1G29030.1entrez:839777
Gene3D:1.25.10.10GeneID:839777GO:GO:0005829Gramene:AT1G29030.1
hmmpanther:PTHR12758hmmpanther:PTHR12758:SF19HOGENOM:HOG000239017InterPro:IPR008383
InterPro:IPR011989InterPro:IPR016024KEGG:ath:AT1G29030OMA:KATNNIN
Pfam:PF05918PhylomeDB:Q8GXH2Proteomes:UP000006548RefSeq:NP_174198.2
SMR:Q8GXH2STRING:3702.AT1G29030.1SUPFAM:SSF48371TAIR:AT1G29030
UniGene:At.40821UniProt:Q8GXH2
Coordinates (TAIR10) chr1:-:10129201..10133697
Molecular Weight (calculated) 62283.50 Da
IEP (calculated) 9.18
GRAVY (calculated) -0.52
Length 556 amino acids
Sequence (TAIR10)
(BLAST)
001: MSEQYSEDAK HIEKLYEFDE RLSESTDKSQ NVQDYEGIIE LSKTNIKTKQ LGAQLIPRYF KFFTSLATEA FDAYLDIFDE VEVGVRVQAI RGLPLFCKDT
101: PDFISKIIDV LVQCLNTEEF VERDAVHKAL MSLFRQDTKA SLTALFKHTE ATLSTDEQIR EKVLHFIRDK VFPLKGELLK PQQEMERHIT DLIKKSLGDV
201: TGEEFNMFMD FLKSLSIFGG KAPQERMQEL VEIIEGQADL DSEFNVSDTD HIDRFISCLQ TALPFFARGA PGSKFLNYLN KNIMPAFDQL PEERKLNLLR
301: ALAEMSPYTT AQVARQILPS IVQLLKKYMP ARKTGEEMNF TYVECLLYVL HHLAHKAPNA TNSLCGYKIV TGQPSDRLGE DFSEFNKEFT ERLTSVEDLT
401: KATMKKLTQG MSEHSKAMST AKTDEEKSIV KTKKQSTTTG LRTCNNILAM TKGLHAKAPS FIGNTSVTLS WKEPTKVTKP LASTTTGGKR PANGAGNNVG
501: AKKARVQNQQ QVVNKRSEGI SHGGGRGSHR GRGRGQGQGR HSGGGGGRGR GRRGFW
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)