AT2G39360.1
Subcellular Consensus
(Prediction and Experimental) min: :max .
SUBAcon:plasma membrane 1.000 What is SUBAcon? |
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Experimental Localisations and PPI |
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SUBAcon links
AGI-AGI relationships |
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Description (TAIR10) | protein_coding : Protein kinase superfamily protein | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Curator Summary (TAIR10) |
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Computational Description (TAIR10) |
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 117164 Blast hits to 115761 proteins in 4506 species: Archae - 99; Bacteria - 13343; Metazoa - 43886; Fungi - 9766; Plants - 32814; Viruses - 370; Other Eukaryotes - 16886 (source: NCBI BLink). | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Protein Annotations |
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Coordinates (TAIR10) | chr2:-:16437592..16440039 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Molecular Weight (calculated) | 91326.40 Da | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
IEP (calculated) | 6.52 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
GRAVY (calculated) | -0.13 | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Length | 815 amino acids | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sequence (TAIR10) (BLAST) |
001: MINLKLFLEL KLCFLITLLC SSHISSVSDT FFINCGSPTN VTVNNRTFVS DNNLVQGFSV GTTDSNSGDE STLFQTARVF SDESSSTYRF PIEEHGWFLI 101: RIYFLPLVSA SQDLTTARFS VSAQNFTLIR EYKPSTTSVV REYILNVTTD SLLLQFLPRT GSVSFINALE VLRLPETLIP EDAKLIGTQK DLKLSSHAME 201: TVSRVNMGNL SVSRDQDKLW RQWDSDSAYK AHFGTPVMNL KAVNFSAGGI TDDIAPVYVY GTATRLNSDL DPNTNANLTW TFKVEPGFDY FVRFHFCNII 301: VDPFGFERQI RFDIFVNSEK VRTIDMTEVL NGTFGAPFFV DAVMRKAKSR EGFLNLSIGL VMDVSSYPVS FINGFEISKL SNDKRSLDAF DAILPDGSSS 401: NKSSNTSVGL IAGLSAALCV ALVFGVVVSW WCIRKRRRRN RQMQTVHSRG DDHQIKKNET GESLIFSSSK IGYRYPLALI KEATDDFDES LVIGVGGFGK 501: VYKGVLRDKT EVAVKRGAPQ SRQGLAEFKT EVEMLTQFRH RHLVSLIGYC DENSEMIIVY EYMEKGTLKD HLYDLDDKPR LSWRQRLEIC VGAARGLHYL 601: HTGSTRAIIH RDVKSANILL DDNFMAKVAD FGLSKTGPDL DQTHVSTAVK GSFGYLDPEY LTRQQLTEKS DVYSFGVVML EVVCGRPVID PSLPREKVNL 701: IEWAMKLVKK GKLEDIIDPF LVGKVKLEEV KKYCEVTEKC LSQNGIERPA MGDLLWNLEF MLQVQAKDEK AAMVDDKPEA SVVGSTMQFS VNGVGDIAGV 801: SMSKVFAQMV REETR |
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See Also |
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Citation
If you find this resource useful please cite one of the following publications:
Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)
Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)