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AT2G39360.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Predictors External Curations
AmiGO : plasma membrane 17317660
AmiGO : plasma membrane 17644812
SwissProt : plasma membrane 16381842
TAIR : plasma membrane 17317660
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Protein kinase superfamily protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Protein kinase superfamily protein; FUNCTIONS IN: kinase activity; INVOLVED IN: protein amino acid phosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 12 growth stages; CONTAINS InterPro DOMAIN/s: Protein kinase, ATP binding site (InterPro:IPR017441), Malectin/receptor-like protein kinase (InterPro:IPR021720), Protein kinase, catalytic domain (InterPro:IPR000719), Serine-threonine/tyrosine-protein kinase (InterPro:IPR001245), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: hercules receptor kinase 1 (TAIR:AT3G46290.1); Has 117164 Blast hits to 115761 proteins in 4506 species: Archae - 99; Bacteria - 13343; Metazoa - 43886; Fungi - 9766; Plants - 32814; Viruses - 370; Other Eukaryotes - 16886 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT2G39360-MONOMERBioGrid:3859EC:2.7.11.-eggNOG:COG0515
eggNOG:KOG1187EMBL:AC004218EMBL:AF325084EMBL:CP002685
EnsemblPlants:AT2G39360EnsemblPlants:AT2G39360.1entrez:818521Gene3D:2.60.120.200
GeneID:818521Genevisible:O80623GO:GO:0004674GO:GO:0005524
GO:GO:0005886GO:GO:0016021Gramene:AT2G39360.1hmmpanther:PTHR27003
hmmpanther:PTHR27003:SF69HOGENOM:HOG000238317InParanoid:O80623InterPro:IPR000719
InterPro:IPR001245InterPro:IPR008271InterPro:IPR011009InterPro:IPR013320
InterPro:IPR017441InterPro:IPR024788iPTMnet:O80623KEGG:ath:AT2G39360
OMA:QNFTLIRPaxDb:O80623Pfam:O80623Pfam:PF07714
Pfam:PF12819Pfscan:PS50011PhylomeDB:O80623PIR:T00546
PRIDE:O80623PRO:PR:O80623PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011ProteinModelPortal:O80623Proteomes:UP000006548RefSeq:NP_181468.1
scanprosite:PS00107scanprosite:PS00108SMART:SM00220SMR:O80623
STRING:3702.AT2G39360.1SUPFAM:SSF56112TAIR:AT2G39360TMHMM:TMhelix
UniGene:At.19567UniProt:O80623
Coordinates (TAIR10) chr2:-:16437592..16440039
Molecular Weight (calculated) 91326.40 Da
IEP (calculated) 6.52
GRAVY (calculated) -0.13
Length 815 amino acids
Sequence (TAIR10)
(BLAST)
001: MINLKLFLEL KLCFLITLLC SSHISSVSDT FFINCGSPTN VTVNNRTFVS DNNLVQGFSV GTTDSNSGDE STLFQTARVF SDESSSTYRF PIEEHGWFLI
101: RIYFLPLVSA SQDLTTARFS VSAQNFTLIR EYKPSTTSVV REYILNVTTD SLLLQFLPRT GSVSFINALE VLRLPETLIP EDAKLIGTQK DLKLSSHAME
201: TVSRVNMGNL SVSRDQDKLW RQWDSDSAYK AHFGTPVMNL KAVNFSAGGI TDDIAPVYVY GTATRLNSDL DPNTNANLTW TFKVEPGFDY FVRFHFCNII
301: VDPFGFERQI RFDIFVNSEK VRTIDMTEVL NGTFGAPFFV DAVMRKAKSR EGFLNLSIGL VMDVSSYPVS FINGFEISKL SNDKRSLDAF DAILPDGSSS
401: NKSSNTSVGL IAGLSAALCV ALVFGVVVSW WCIRKRRRRN RQMQTVHSRG DDHQIKKNET GESLIFSSSK IGYRYPLALI KEATDDFDES LVIGVGGFGK
501: VYKGVLRDKT EVAVKRGAPQ SRQGLAEFKT EVEMLTQFRH RHLVSLIGYC DENSEMIIVY EYMEKGTLKD HLYDLDDKPR LSWRQRLEIC VGAARGLHYL
601: HTGSTRAIIH RDVKSANILL DDNFMAKVAD FGLSKTGPDL DQTHVSTAVK GSFGYLDPEY LTRQQLTEKS DVYSFGVVML EVVCGRPVID PSLPREKVNL
701: IEWAMKLVKK GKLEDIIDPF LVGKVKLEEV KKYCEVTEKC LSQNGIERPA MGDLLWNLEF MLQVQAKDEK AAMVDDKPEA SVVGSTMQFS VNGVGDIAGV
801: SMSKVFAQMV REETR
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)