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AT4G32300.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
plasma membrane 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
no PPI data
Description (TAIR10) protein_coding : S-domain-2 5
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
S-domain-2 5 (SD2-5); FUNCTIONS IN: carbohydrate binding, protein kinase activity, kinase activity; INVOLVED IN: protein amino acid autophosphorylation; LOCATED IN: plasma membrane; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s: Curculin-like (mannose-binding) lectin (InterPro:IPR001480), Protein kinase, ATP binding site (InterPro:IPR017441), Protein kinase, catalytic domain (InterPro:IPR000719), Serine/threonine-protein kinase-like domain (InterPro:IPR017442), Protein kinase-like domain (InterPro:IPR011009), Serine/threonine-protein kinase, active site (InterPro:IPR008271); BEST Arabidopsis thaliana protein match is: S-locus lectin protein kinase family protein (TAIR:AT5G35370.1); Has 119450 Blast hits to 117822 proteins in 4317 species: Archae - 101; Bacteria - 12813; Metazoa - 43689; Fungi - 10139; Plants - 34770; Viruses - 395; Other Eukaryotes - 17543 (source: NCBI BLink).
Protein Annotations
BioCyc:ARA:AT4G32300-MONOMERBioGrid:14651EC:2.7.11.1eggNOG:ENOG410IFNU
eggNOG:ENOG410Y0GQEMBL:AL021811EMBL:AL034567EMBL:AL161581
EMBL:AY091010EMBL:AY117229EMBL:CP002687EnsemblPlants:AT4G32300
EnsemblPlants:AT4G32300.1entrez:829365Gene3D:2.60.120.200Gene3D:2.90.10.10
GeneID:829365Genevisible:Q8RWZ5GO:GO:0004672GO:GO:0004674
GO:GO:0005516GO:GO:0005524GO:GO:0005886GO:GO:0016021
GO:GO:0030246GO:GO:0031625GO:GO:0046777Gramene:AT4G32300.1
hmmpanther:PTHR27002hmmpanther:PTHR27002:SF31HOGENOM:HOG000116559InParanoid:Q8RWZ5
InterPro:IPR000719InterPro:IPR001480InterPro:IPR008271InterPro:IPR011009
InterPro:IPR013320InterPro:IPR017441InterPro:IPR024171KEGG:04150+2.7.11.1
KEGG:04151+2.7.11.1KEGG:ath:AT4G32300OMA:WSFYDQSPaxDb:Q8RWZ5
Pfam:PF00069Pfam:PF01453Pfam:Q8RWZ5Pfscan:PS50011
Pfscan:PS50927PhylomeDB:Q8RWZ5PIR:T05341PIRSF:PIRSF000641
PRIDE:Q8RWZ5PRO:PR:Q8RWZ5PROSITE:PS00107PROSITE:PS00108
PROSITE:PS50011PROSITE:PS50927ProteinModelPortal:Q8RWZ5Proteomes:UP000006548
RefSeq:NP_194957.2scanprosite:PS00107scanprosite:PS00108SMART:SM00108
SMART:SM00220SMR:Q8RWZ5STRING:3702.AT4G32300.1SUPFAM:SSF51110
SUPFAM:SSF56112SwissPalm:Q8RWZ5TAIR:AT4G32300tair10-symbols:SD2-5
TMHMM:TMhelixUniGene:At.27667UniProt:Q8RWZ5
Coordinates (TAIR10) chr4:+:15599970..15602435
Molecular Weight (calculated) 89744.50 Da
IEP (calculated) 6.45
GRAVY (calculated) -0.15
Length 821 amino acids
Sequence (TAIR10)
(BLAST)
001: MRGVFIVIVT CLVFLPDPLR AGVASIGSIT PGFGGSQMNY INNDGIFLES NNSAFGFGFV TTQDSVTLFT LSIIHKSSTK LIWSANRASP VSNSDKFVFD
101: DNGNVVMEGT EVWRLDNSGK NASRIELRDS GNLVVVSVDG TSIWESFDHP TDTLITNQAF KEGMKLTSSP SSSNMTYALE IKSGDMVLSV NSLTPQVYWS
201: MANARERIIN KDGGVVTSSS LLGNSWRFFD QKQVLLWQFV FSDNKDDNTT WIAVLGNNGV ISFSNLGSGA SAADSSTKIP SDLCGTPEPC GPYYVCSGSK
301: VCGCVSGLSR ARSDCKTGIT SPCKKTKDNA TLPLQLVSAG DGVDYFALGY APPFSKKTDL DSCKEFCHNN CSCLGLFFQN SSGNCFLFDY IGSFKTSGNG
401: GSGFVSYIKI ASTGSGGGDN GEDDGKHFPY VVIIVVVTVF IIAVLIFVAF RIHKRKKMIL EAPQESSEED NFLENLSGMP IRFAYKDLQS ATNNFSVKLG
501: QGGFGSVYEG TLPDGSRLAV KKLEGIGQGK KEFRAEVSII GSIHHLHLVR LRGFCAEGAH RLLAYEFLSK GSLERWIFRK KDGDVLLDWD TRFNIALGTA
601: KGLAYLHEDC DARIVHCDIK PENILLDDNF NAKVSDFGLA KLMTREQSHV FTTMRGTRGY LAPEWITNYA ISEKSDVYSY GMVLLELIGG RKNYDPSETS
701: EKCHFPSFAF KKMEEGKLMD IVDGKMKNVD VTDERVQRAM KTALWCIQED MQTRPSMSKV VQMLEGVFPV VQPPSSSTMG SRLYSSFFKS ISEDGGATTS
801: SGPSDCNSEN YLSAVRLSGP R
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)