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AT2G36720.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
ASURE: nucleus
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain; FUNCTIONS IN: DNA binding, zinc ion binding; INVOLVED IN: regulation of transcription, DNA-dependent; LOCATED IN: nucleus; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro DOMAIN/s: Zinc finger, RING-type (InterPro:IPR001841), Zinc finger, PHD-type, conserved site (InterPro:IPR019786), Zinc finger, PHD-type (InterPro:IPR001965), Zinc finger, FYVE/PHD-type (InterPro:IPR011011), Acyl-CoA N-acyltransferase (InterPro:IPR016181), Zinc finger, PHD-finger (InterPro:IPR019787); BEST Arabidopsis thaliana protein match is: Acyl-CoA N-acyltransferase with RING/FYVE/PHD-type zinc finger domain (TAIR:AT2G27980.1); Has 4396 Blast hits to 3645 proteins in 210 species: Archae - 0; Bacteria - 0; Metazoa - 2916; Fungi - 398; Plants - 780; Viruses - 0; Other Eukaryotes - 302 (source: NCBI BLink).
Protein Annotations
eggNOG:ENOG410IEVAeggNOG:ENOG410Y9P5EMBL:AY093116EMBL:BT008812
EMBL:CP002685EnsemblPlants:AT2G36720EnsemblPlants:AT2G36720.1entrez:818244
Gene3D:3.30.40.10GeneID:818244GO:GO:0008270GO:GO:0016746
Gramene:AT2G36720.1hmmpanther:PTHR24098hmmpanther:PTHR24098:SF5HOGENOM:HOG000149118
InterPro:IPR001965InterPro:IPR011011InterPro:IPR013083InterPro:IPR019786
InterPro:IPR019787InterPro:IPR032308KEGG:ath:AT2G36720OMA:RKYSAND
Pfam:PF00628Pfam:PF16135Pfscan:PS50016PhylomeDB:Q8RWG0
PROSITE:PS01359PROSITE:PS50016Proteomes:UP000006548RefSeq:NP_850270.1
scanprosite:PS01359SMART:SM00249SMR:Q8RWG0STRING:3702.AT2G36720.1
SUPFAM:SSF57903TAIR:AT2G36720UniGene:At.37517UniProt:Q8RWG0
Coordinates (TAIR10) chr2:+:15393447..15399189
Molecular Weight (calculated) 110911.00 Da
IEP (calculated) 8.49
GRAVY (calculated) -0.23
Length 1007 amino acids
Sequence (TAIR10)
(BLAST)
0001: MKEDLVPESN SSVWQSPVKR LAVDGECGEA GDRSRTSCKR IKTTQVNGFI VYTRTRKTKF TKLHEQEDEN AGLSNHLEES KPTSGVTSGF GGDMCRSSSV
0101: GETNVSGSSC VKNTLVESSS GKVVVIERLV TGGLAESPAV ETDSSSLVDV VIDDINFVEL LHEAIPVEIL SEGSLDFEVK RLGTKVRTMG KSYSVSEKKK
0201: HGSFKRTAQI YKSIVRMKKV NNLVPENVEV LAEPDFGREG LDEQSHSVSL ADKSILIRSR PETVRDLFET GLLDGLSVVY MGTVKSQAFP LRGIIRDGGI
0301: LCSCSSCDWA NVISTSKFEI HACKQYRRAS QYICFENGKS LLDVLNISRN TPLHALEATI LDAVDYASKE KRFTCKRCKG PFPFSSLGHR GFLCKSCSEV
0401: ETSQASLAAT RTSTSAPACI TSPVKSRLKI TRKPSESTSI SPVFMSSLGN STRKITRKAL RQALVGKAYL SASTNVSSQK KCRSKFKKML TQHSVTPKAL
0501: KSVSLSVSSK KRSYRLARKD QGLHKLVFDR GGLPEGTELG YYARGQKLLG GYKMGAGIYC YCCKCEVSPS LFEAHAGWAS RRKPYFYIYT SNGVSLHEWA
0601: TTFSHGRKYS ANDNNDLCVI CADGGNLLLC DSCPRAFHIE CVSLPSIPRG NWHCKYCENK FTSEIAGEYN VNSSAVGQLE GVDPVDQLAG RCIRVVKNME
0701: AETNGCVLCS GSDFCRSGFG PRTIIICDQC EKEYHIGCLS SQNIVDLKEL PKGNWFCSMD CTRINSTLQK LLLGGAEKLS DSSLGIIQTK QERNDVYSIS
0801: DLDIRWRLIS GKVTSPESRM LLSQALAIFH DCFDPIVDPL SGSNLIPRMV YGKTMQGQDY GGICCAVLTV NATVVSAGLL RVFGREVAEL PLVATRMCSR
0901: EKGYFQLLFS CIEKLLSSLN VESIVVPAAE EAEPLWMNKF GFRKLAPEQL SKYIKICYQM VRFKGASMLQ KPVDSHQIID KTIETGASLE ENFDLKQANE
1001: LYVHPLC
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)