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AT1G76510.1
Subcellular Consensus
(Prediction and Experimental)
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SUBAcon:
nucleus 1.000
What is SUBAcon?
Experimental Localisations and PPI
FP MS/MS PPI
SUBAcon links
AGI-AGI relationships
Coexpression PPI
Description (TAIR10) protein_coding : ARID/BRIGHT DNA-binding domain-containing protein
Curator
Summary (TAIR10)
Computational
Description (TAIR10)
ARID/BRIGHT DNA-binding domain-containing protein; FUNCTIONS IN: sequence-specific DNA binding transcription factor activity; INVOLVED IN: regulation of transcription; LOCATED IN: intracellular; EXPRESSED IN: 25 plant structures; EXPRESSED DURING: 14 growth stages; CONTAINS InterPro DOMAIN/s: Heat shock protein Hsp20 (InterPro:IPR002068), HSP20-like chaperone (InterPro:IPR008978), ARID/BRIGHT DNA-binding domain (InterPro:IPR001606); BEST Arabidopsis thaliana protein match is: ARID/BRIGHT DNA-binding domain-containing protein (TAIR:AT1G20910.1); Has 538 Blast hits to 538 proteins in 87 species: Archae - 0; Bacteria - 4; Metazoa - 322; Fungi - 39; Plants - 149; Viruses - 0; Other Eukaryotes - 24 (source: NCBI BLink).
Protein Annotations
EMBL:AC015450EMBL:AK229370EMBL:AK317473EMBL:CP002684
EnsemblPlants:AT1G76510EnsemblPlants:AT1G76510.1EnsemblPlants:AT1G76510.2entrez:843984
ExpressionAtlas:Q0WNR6Gene3D:1.10.150.60Gene3D:2.60.40.790GeneID:843984
Genevisible:Q0WNR6GO:GO:0003677GO:GO:0005634GO:GO:0006351
GO:GO:0006355hmmpanther:PTHR15348hmmpanther:PTHR15348:SF6HOGENOM:HOG000239411
InParanoid:Q0WNR6InterPro:IPR001606InterPro:IPR002068InterPro:IPR008978
iPTMnet:Q0WNR6Pfam:PF01388Pfam:Q0WNR6Pfscan:PS01031
Pfscan:PS51011PhylomeDB:Q0WNR6PIR:A96793PRIDE:Q0WNR6
PRO:PR:Q0WNR6PROSITE:PS01031PROSITE:PS51011ProteinModelPortal:Q0WNR6
Proteomes:UP000006548RefSeq:NP_177777.3RefSeq:NP_974156.1SMART:SM00501
SMR:Q0WNR6SUPFAM:SSF46774SUPFAM:SSF49764TAIR:AT1G76510
UniGene:At.34646UniProt:Q0WNR6
Coordinates (TAIR10) chr1:-:28708927..28712498
Molecular Weight (calculated) 48042.30 Da
IEP (calculated) 4.96
GRAVY (calculated) -0.65
Length 434 amino acids
Sequence (TAIR10)
(BLAST)
001: MMADTEMQEQ DVPSGTKGVV EEPSELEKDL NSIERPKSPV PEDTTHTLDS DVHLSDAPIA NQIEANEEVG GQNSVDGRNG DVDQSEKKIT SDGGQEETTL
101: GESNPLKGDP SSPHVPEESV KKWKTWLLSD AEAREVDEAG APQDQEAFIK EVEAFNKENF LEFKAPKFYG QPLNCLKLWR AVIKLGGYDV VTTSKLWRQV
201: GESFHPPKTC TTVSWTFRIF YEKALLEYEK HLRQNGELNL PGSASLPSSG IEKEASSHQA SGSGRTRRDA AARAMQGWHS QRLLGSGEVT EPIVKEKGLN
301: STPKQKNLKN IGVQKQKTTT GMDLVFSHES EKQSTAEVID VGPPADWVKI NVRETKDCFE IFALVPGLLR EEVRVQSDPA GRLVIAGQPE QLDNPWGITP
401: FKKVVNFPAR IDPLHTSAVV SLHGRLFVRV PFEQ
See Also
Citation
If you find this resource useful please cite one of the following publications:

Hooper CM, Castleden I, Tanz SK, Aryamanesh, and Millar, AH (2017) SUBA4: the interactive data analysis centre for Arabidopsis subcellular protein locations Nucleic Acids Res. Jan 4;45(D1):D1064-D1074. doi: 10.1093/nar/gkw1041 (PubMed)

Hooper CM, Tanz SK, Castleden IR, Vacher MA, Small ID, Millar AH (2014) "SUBAcon: a consensus algorithm for unifying the subcellular localization data of the Arabidopsis proteome. Bioinformatics." 1;30(23):3356-64. (Bioinformatics) (PubMed)